| Protein: | BOI1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 980 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BOI1.
| Description | E-value | Query Range |
Subject Range |
|
|
481.0 | [0..7] | [963..3] |
|
|
459.0 | [0..3] | [940..33] |
|
|
408.0 | [0..71] | [963..20] |
|
|
316.0 | [0..127] | [891..36] |
|
|
305.0 | [0..14] | [936..3] |
|
|
299.0 | [0..17] | [934..31] |
|
|
276.0 | [0..526] | [974..1] |
|
|
269.0 | [0..360] | [902..179] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MSLEGNTLGK GAKSFPLYIA VNQYSKRMED ELNMKPGDKI KVITDDGEYN DGWYYGRNLR 60
61 TKEEGLYPAV FTKRIAIEKP ENLHKSPTQE SGNSGVKYGN LNDSASNIGK VSSHQQENRY 120
121 TSLKSTM
|
| Detection Method: |  |
| Confidence: | 47.30103 |
| Match: | 1g83A |
| Description: | Fyn proto-oncogene tyrosine kinase, SH3 domain; Tyrosine kinase Fyn |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [128-209] |
1 11 21 31 41 51
| | | | | |
1 SDIDKALEEL RSGSVEQEVS KSPTRVPEVS TPQLQDEQTL IQEKTRNEEN TTHDSLFSST 60
61 ADLNLSSESL KNISKSNIST KS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.545 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.545 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.420 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.409 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.394 | d.224.1 | SufE-like |
| View | Download | 0.363 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.363 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.328 | a.77.1 | DEATH domain |
| View | Download | 0.327 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.301 | a.77.1 | DEATH domain |
|
Region A: Residues: [210-294] |
1 11 21 31 41 51
| | | | | |
1 LEPSSESVRQ LDLKMAKSWS PEEVTDYFSL VGFDQSTCNK FKEHQVSGKI LLELELEHLK 60
61 ELEINSFGIR FQIFKEIRNI KSAID
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1kw4A |
| Description: | Polyhomeotic |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [295-611] |
1 11 21 31 41 51
| | | | | |
1 SSSNKLDADY STFAFENQAA QLMPAATVNR DEIQQQISSK CNKLSSESSD RKSSSVTTEL 60
61 QRPSSVVVNP NFKLHDPAEQ ILDMTEVPNL FADKDIFESP GRAPKPPSYP SPVQPPQSPS 120
121 FNNRYTNNNA RFPPQTTYPP KNKNPTVYSN GLIPNSSTSS DNSTGKFKFP AMNGHDSNSR 180
181 KTTLTSATIP SINTVNTDES LPAISNISSN ATSHHPNRNS VVYNNHKRTE SGSSFVDLFN 240
241 RISMLSPVKS SFDEEETKQP SKASRAVFDS ARRKSSYGHS RDASLSEMKK HRRNSSILSF 300
301 FSSKSQSNPT SPTKQTF
|
| Detection Method: | |
| Confidence: | 14.5 |
| Match: | |
| Description: | No description for 1i3qA was found. |
|
Region A: Residues: [612-744] |
1 11 21 31 41 51
| | | | | |
1 TIDPAKMTSH SRSQSNSYSH ARSQSYSHSR KHSLVTSPLK TSLSPINSKS NIALAHSETP 60
61 TSSNNKEAVS QPSEGKHKHK HKHKSKHKHK NSSSKDGSSE EKSKKKLFSS TKESFVGSKE 120
121 FKRSPSELTQ KST
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.237 | c.23.1 | CheY-like |
|
Region A: Residues: [745-908] |
1 11 21 31 41 51
| | | | | |
1 KSILPRSNAK KQQTSAFTEG IRSITAKESM QTADCSGWMS KKGTGAMGTW KQRFFTLHGT 60
61 RLSYFTNTND EKERGLIDIT AHRVLPASDD DRLISLYAAS LGKGKYCFKL VPPQPGSKKG 120
121 LTFTEPRVHY FAVENKSEMK AWLSAIIKAT IDIDTSVPVI SSYA
|
| Detection Method: | |
| Confidence: | 65.134302 |
| Match: | 1fhwA |
| Description: | Grp1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [909-980] |
1 11 21 31 41 51
| | | | | |
1 TPTIPLSKAQ TLLEEARLQT QLRDAEEEEG RDQFGWDDTQ NKRNSNYPIE QDQFETSDYL 60
61 ESSAFEYPGG RL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.393 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.393 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.351 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.348 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.348 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.324 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.323 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.268 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.247 | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.233 | d.58.11 | EF-G/eEF-2 domains III and V |
