YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: AAR2
Organism: Saccharomyces cerevisiae
Length: 355 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AAR2.

Description E-value Query
Range
Subject
Range
CG12320-PA - This gene is referred to in FlyBase by the symbol Dmel\CG12320 (CG12320, FBgn0038590). It is a prote...
375.0 [0..4] [327..25]
gi|114681744, gi... - gi|114681744|ref|XP_001166196.1| PREDICTED: similar to C20orf4 isoform 4 [Pan troglodytes], gi|11468...
365.0 [0..3] [327..20]
C20orf4 - chromosome 20 open reading frame 4
364.0 [0..3] [327..20]
AAR2_PONAB - Protein AAR2 homolog OS=Pongo abelii GN=AAR2 PE=2 SV=1
CT004_PONPY - Uncharacterized protein C20orf4 homolog - Pongo pygmaeus (Orangutan)
359.0 [0..3] [327..20]
gi|57104192 - gi|57104192|ref|XP_534409.1| PREDICTED: similar to Protein C20orf4 homolog [Canis familiaris]
359.0 [0..3] [327..20]
AAR2_MACFA - Protein AAR2 homolog OS=Macaca fascicularis GN=AAR2 PE=2 SV=1
358.0 [0..3] [327..20]
AAR2_BOVIN - Protein AAR2 homolog OS=Bos taurus GN=AAR2 PE=2 SV=1
358.0 [0..3] [332..20]

Back

Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTVPFTSAP IEVTIGIDQY SFNVKENQPF HGIKDIPIGH VHVIHFQHAD NSSMRYGYWF  60
   61 DCRMGNFYIQ YDPKDGLYKM MEERDGAKFE NIVHNFKERQ MMVSYPKIDE DDTWYNLTEF 120
  121 VQMDKIRKIV RKDENQFSYV DSSMTTVQEN ELLKSSLQKA GSKM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EAKNEDDPAH SLNYTVINFK SREAIRPGHE MEDFLDKSYY LNTVMLQGIF KNSSNYFGEL  60
   61 QFAFLNAMFF GNYGSSLQWH AMIELICSSA TVPKHMLDKL DEILYYQIKT LPEQYSDILL 120
  121 NERVWNICLY SSFQKNSLHN TEKIMENKYP ELLGKDNEDD ALIYGISDEE RDDEDDEHNP 180
  181 TIVGGLYYQR P

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle