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View Structure Prediction Details

Protein: RRT1
Organism: Saccharomyces cerevisiae
Length: 103 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for RRT1.

Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILFKNLVFL PSILIGYISI RVSLLVWVNW VLVWSSCFQV AFIFSLWYFI LSIYTFFYSK  60
   61 KIKQIISYEP SYFVFSYRAI DLCPERVLLY FFCIFNNVVF PML

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.856 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.856 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.846 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.846 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.838 a.24.9 alpha-catenin/vinculin
View Download 0.830 a.24.9 alpha-catenin/vinculin
View Download 0.825 a.8.8 Description not found.
View Download 0.820 a.24.9 alpha-catenin/vinculin
View Download 0.759 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.696 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle