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View Structure Prediction Details

Protein: MRPL16
Organism: Saccharomyces cerevisiae
Length: 232 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRPL16.

Description E-value Query
Range		 Subject
Range
RM16_YEAST - 54S ribosomal protein L16, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
MRPL16 - Mitochondrial ribosomal protein of the large subunit
 5.0E-69 [1..232] [1..232]
gi|19423868 - gi|19423868|gb|AAL88713.1|AF486812_1 ribosomal protein L10 [Homo sapiens]
 4.0E-45 [24..195] [5..183]
gi|167045820 - gi|167045820|gb|ABZ10488.1| ribosomal protein L10 (predicted) [Callithrix jacchus]
gi|226955351 - gi|226955351|gb|ACO95346.1| ribosomal protein L10 (predicted) [Dasypus novemcinctus]
RL10_PAPAN - 60S ribosomal protein L10 OS=Papio anubis GN=RPL10 PE=3 SV=1
gi|170649634 - gi|170649634|gb|ACB21221.1| ribosomal protein L10 (predicted) [Callicebus moloch]
RPL10 - ribosomal protein L10
gi|51980562 - gb|AAH82196.1| Unknown (protein for MGC:98731) [Xenopus laevis]
RL10_MOUSE - 60S ribosomal protein L10 OS=Mus musculus GN=Rpl10 PE=1 SV=3
RL10_RAT - 60S ribosomal protein L10 OS=Rattus norvegicus GN=Rpl10 PE=1 SV=3
gi|190576574 - gi|190576574|gb|ACE79064.1| 60S ribosomal protein L10 (predicted) [Sorex araneus]
tr|F7AYR2|F7AYR2... - Uncharacterized protein OS=Equus caballus OX=9796 GN=RPL10 PE=4 SV=1
gi|74008842, gi|... - gi|74008842|ref|XP_867641.1| PREDICTED: similar to ribosomal protein L10 isoform 7 [Canis familiaris...
ENSMMUT000000077... - null, null
 6.0E-44 [24..195] [5..184]
RL10_SHEEP - 60S ribosomal protein L10 OS=Ovis aries GN=RPL10 PE=2 SV=1
RL10_BOVIN - 60S ribosomal protein L10 OS=Bos taurus GN=RPL10 PE=2 SV=4
RL10_PIG - 60S ribosomal protein L10 OS=Sus scrofa GN=RPL10 PE=1 SV=3
gi|51814392 - gi|51814392|gb|AAU09485.1| GekBS044P [Gekko japonicus]
 3.0E-43 [24..195] [5..184]
RL103_ORYSA, R10... - (Q40649) 60S ribosomal protein L10-3 (QM/R22), 60S ribosomal protein L10-2 (Putative tumor suppresso...
RL102_ORYSJ - 60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12 PE=2 SV=1
RL102_ORYSI - 60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12 PE=2 SV=2
 6.0E-43 [24..198] [5..187]
gi|15293885 - gi|15293885|gb|AAK95135.1|AF401563_1 ribosomal protein L10 [Ictalurus punctatus]
 7.0E-43 [24..198] [5..187]
RL16_CLOAB - 50S ribosomal protein L16 OS=Clostridium acetobutylicum GN=rplP PE=3 SV=1
RL16_CLOAB - 50S ribosomal protein L16 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG ...
 1.0E-42 [41..190] [2..143]
RL102_ARATH - 60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2
 6.0E-42 [24..198] [5..187]

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Predicted Domain #1
Region A:
Residues: [1-232] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPYLTRMNL SIKMGGLTLK ESSPNAFLNN TTIARRFKHE YAPRFKIVQK KQKGRVPVRT  60
   61 GGSIKGSTLQ FGKYGLRLKS EGIRISAQQL KEADNAIMRY VRPLNNGHLW RRLCTNVAVC 120
  121 IKGNETRMGK GKGGFDHWMV RVPTGKILFE INGDDLHEKV AREAFRKAGT KLPGVYEFVS 180
  181 LDSLVRVGLH SFKNPKDDPV KNFYDENAKK PSKKYLNILK SQEPQYKLFR GR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 155.9897
Match: 1lnrK_
Description: No description for 1lnrK_ was found.

Predicted functions:

Term Confidence Notes
structural constituent of ribosome 9.80692012906383 bayes_pls_golite062009
structural molecule activity 9.22985932721781 bayes_pls_golite062009
peptidyltransferase activity 3.83536146028392 bayes_pls_golite062009
transferase activity, transferring amino-acyl groups 0.386783133410145 bayes_pls_golite062009
catalytic activity 0.145440139643068 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle