YRC Public Data Repository - Protein Structure Prediction

Protein:	PET9
Organism:	Saccharomyces cerevisiae
Length:	318 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PET9.

Description	E-value	Query Range	Subject Range
gi\|170962 - gi\|170962\|gb\|AAA97484.1\| ADP/ATP-translocator protein [Saccharomyces cerevisiae]	5.0E-92	[1..318]	[1..318]
ADT3_BOVIN - ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=1 SV=3	7.0E-89	[17..310]	[2..296]
ADT_NEUCR - ADP,ATP carrier protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257... ADT_NEUCR - ADP,ATP carrier protein OS=Neurospora crassa GN=acp PE=3 SV=1	1.0E-88	[11..318]	[1..309]
gi\|90085585 - gi\|90085585\|dbj\|BAE91533.1\| unnamed protein product [Macaca fascicularis] SLC25A6 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6	3.0E-88	[17..310]	[2..296]
ADT2_MOUSE - ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3	3.0E-88	[17..311]	[2..297]
gi\|4115756, gi\|4... - gi\|4115761\|dbj\|BAA36510.1\| ADP/ATP translocase [Rana rugosa], gi\|4115756\|dbj\|BAA36509.1\| ADP/ATP tra...	4.0E-88	[17..312]	[2..298]

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Predicted Domain #1

Region A:
Residues: [1-122]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSNAQVKTP LPPAPAPKKE SNFLIDFLMG GVSAAVAKTA ASPIERVKLL IQNQDEMLKQ  60
   61 GTLDRKYAGI LDCFKRTATQ EGVISFWRGN TANVIRYFPT QALNFAFKDK IKAMFGFKKE 120
  121 EG

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	32.958607
Match:	PF00153
Description:	Mitochondrial carrier protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [123-224]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YAKWFAGNLA SGGAAGALSL LFVYSLDYAR TRLAADSKSS KKGGARQFNG LIDVYKKTLK  60
   61 SDGVAGLYRG FLPSVVGIVV YRGLYFGMYD SLKPLLLTGS LE

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	28.958607
Match:	PF00153
Description:	Mitochondrial carrier protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [225-318]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSFLASFLLG WVVTTGASTC SYPLDTVRRR MMMTSGQAVK YDGAFDCLRK IVAAEGVGSL  60
   61 FKGCGANILR GVAGAGVISM YDQLQMILFG KKFK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	24.30103
Match:	PF00153
Description:	Mitochondrial carrier protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits