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View Structure Prediction Details

Protein: RPL19B, RPL19A
Organism: Saccharomyces cerevisiae
Length: 189 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPL19B, RPL19A.

Description E-value Query
Range
Subject
Range
RPL19 - ribosomal protein L19
RL19_PONPY - 60S ribosomal protein L19 - Pongo pygmaeus (Orangutan)
gi|55645311 - gi|55645311|ref|XP_511450.1| PREDICTED: similar to Mus musculus ribosomal protein L19 [Pan troglodyt...
RL19_MACFA - 60S ribosomal protein L19 OS=Macaca fascicularis GN=RPL19 PE=2 SV=2
RL19_RAT - 60S ribosomal protein L19 OS=Rattus norvegicus GN=Rpl19 PE=1 SV=1
RL19_MOUSE - 60S ribosomal protein L19 OS=Mus musculus GN=Rpl19 PE=1 SV=1
gi|149723888 - gi|149723888|ref|XP_001501482.1| PREDICTED: similar to Mus musculus ribosomal protein L19 [Equus cab...
RL19_PONAB - 60S ribosomal protein L19 OS=Pongo abelii GN=RPL19 PE=2 SV=1
ENSCJAT00000016595 - null
gi|60813596, gi|... - gi|61362558|gb|AAX42243.1| ribosomal protein L19 [synthetic construct], gi|61355098|gb|AAX41101.1| r...
gi|126308220 - gi|126308220|ref|XP_001371270.1| PREDICTED: similar to Mus musculus ribosomal protein L19 [Monodelph...
RL19_CANLF - 60S ribosomal protein L19 OS=Canis lupus familiaris GN=RPL19 PE=1 SV=1
RL19_BOVIN - 60S ribosomal protein L19 OS=Bos taurus GN=RPL19 PE=2 SV=1
4.0E-58 [1..186] [1..186]
gi|91271, gi|198... - pir||A36554 ribosomal protein L19 - mouse, gi|6677773|ref|NP_033104.1| ribosomal protein L19 [Mus mu...
7.0E-58 [1..186] [1..186]
gi|194756322, gi... - gi|194756322|ref|XP_001960428.1| GF11517 [Drosophila ananassae], gi|190621726|gb|EDV37250.1| GF11517...
gi|190659894, gi... - gi|194886903|ref|XP_001976707.1| GG19869 [Drosophila erecta], gi|190659894|gb|EDV57107.1| GG19869 [D...
gi|193910409, gi... - gi|195121666|ref|XP_002005341.1| GI19130 [Drosophila mojavensis], gi|193910409|gb|EDW09276.1| GI1913...
gi|195353338, gi... - gi|195353338|ref|XP_002043162.1| GM11772 [Drosophila sechellia], gi|194127250|gb|EDW49293.1| GM11772...
RpL19-PA, RpL19-PB - The gene Ribosomal protein L19 is referred to in FlyBase by the symbol Dmel\RpL19 (CG2746, FBgn00026...
gi|194145427, gi... - gi|195383834|ref|XP_002050630.1| GJ22263 [Drosophila virilis], gi|194145427|gb|EDW61823.1| GJ22263 [...
gi|195586601, gi... - gi|195586601|ref|XP_002083062.1| GD24903 [Drosophila simulans], gi|194195071|gb|EDX08647.1| GD24903 ...
gi|220942898, gi... - gi|220953012|gb|ACL89049.1| RpL19-PA [synthetic construct], gi|220942898|gb|ACL83992.1| RpL19-PA [sy...
3.0E-56 [1..185] [1..185]
RL192_ARATH - 60S ribosomal protein L19-2 OS=Arabidopsis thaliana GN=RPL19B PE=2 SV=1
2.0E-55 [1..180] [1..180]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
2.0E-55 [1..186] [1..186]
RL19_ICTPU - 60S ribosomal protein L19 OS=Ictalurus punctatus GN=rpl19 PE=2 SV=1
1.0E-54 [1..186] [1..186]
gi|16798651 - gi|16798651|gb|AAL29467.1|AF435591_1 ribosomal protein L19 [Sus scrofa]
3.0E-50 [9..161] [1..153]

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Predicted Domain #1
Region A:
Residues: [1-70]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLRTQKRL AASVVGVGKR KVWLDPNETS EIAQANSRNA IRKLVKNGTI VKKAVTVHSK  60
   61 SRTRAHAQSK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 538.9691
Match: 1k5yP_
Description: No description for 1k5yP_ was found.

Predicted Domain #2
Region A:
Residues: [71-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 REGRHSGYGK RKGTREARLP SQVVWIRRLR VLRRLLAKYR DAGKIDKHLY HVLYKESKGN  60
   61 AFKHKRALVE HIIQAKADAQ REKALNEEAE ARRLKNRAAR DRRAQRVAEK RDALLKEDA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 538.9691
Match: 1k5yP_
Description: No description for 1k5yP_ was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle