| Protein: | SCT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 759 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCT1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..759] | [1..759] |
|
|
0.0 | [49..749] | [5..672] |
|
|
0.0 | [50..597] | [4..540] |
|
|
7.0E-40 | [119..374] | [4..238] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MPAPKLTEKF ASSKSTQKTT NYSSIEAKSV KTSADQAYIY QEPSATKKIL YSIATWLLYN 60
61 IFHCFFREIR GRGSFKVPQQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.490 | a.2.3 | Chaperone J-domain |
| View | Download | 0.324 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.269 | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.254 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.236 | b.84.2 | Rudiment single hybrid motif |
|
Region A: Residues: [81-394] |
1 11 21 31 41 51
| | | | | |
1 GPVIFVAAPH ANQFVDPVIL MGEVKKSVNR RVSFLIAESS LKQPPIGFLA SFFMAIGVVR 60
61 PQDNLKPAEG TIRVDPTDYK RVIGHDTHFL TDCMPKGLIG LPKSMGFGEI QSIESDTSLT 120
121 LRKEFKMAKP EIKTALLTGT TYKYAAKVDQ SCVYHRVFEH LAHNNCIGIF PEGGSHDRTN 180
181 LLPLKAGVAI MALGCMDKHP DVNVKIVPCG MNYFHPHKFR SRAVVEFGDP IEIPKELVAK 240
241 YHNPETNRDA VKELLDTISK GLQSVTVTCS DYETLMVVQT IRRLYMTQFS TKLPLPLIVE 300
301 MNRRMVKGYE FYRN
|
| Detection Method: | |
| Confidence: | 25.69897 |
| Match: | 1k30A_ |
| Description: | Glycerol-3-phosphate (1)-acyltransferase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [395-606] |
1 11 21 31 41 51
| | | | | |
1 DPKIADLTKD IMAYNAALRH YNLPDHLVEE AKVNFAKNLG LVFFRSIGLC ILFSLAMPGI 60
61 IMFSPVFILA KRISQEKART ALSKSTVKIK ANDVIATWKI LIGMGFAPLL YIFWSVLITY 120
121 YLRHKPWNKI YVFSGSYISC VIVTYSALIV GDIGMDGFKS LRPLVLSLTS PKGLQKLQKD 180
181 RRNLAERIIE VVNNFGSELF PDFDSAALRE EF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [607-759] |
1 11 21 31 41 51
| | | | | |
1 DVIDEEEEDR KTSELNRRKM LRKQKIKRQE KDSSSPIISQ RDNHDAYEHH NQDSDGVSLV 60
61 NSDNSLSNIP LFSSTFHRKS ESSLASTSVA PSSSSEFEVE NEILEEKNGL ASKIAQAVLN 120
121 KRIGENTARE EEEEEEEEEE EEEEEEEGKE GDA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
