YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YBL010C
Organism: Saccharomyces cerevisiae
Length: 280 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBL010C.

Description E-value Query
Range
Subject
Range
YBL010C - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein colocalizes wit...
gi|151946384 - gi|151946384|gb|EDN64606.1| conserved protein [Saccharomyces cerevisiae YJM789]
YBB0_YEAST - Uncharacterized protein YBL010C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBL010C ...
0.0 [1..280] [1..280]

Back

Predicted Domain #1
Region A:
Residues: [1-280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDRDQIEPV TNALDAESDS SDDFGNFSDA SVENDLYNQN STLTTSSESV VDNCLNKILP  60
   61 KGEFDLEEET IKNDCFKLSK LIEDERPHVI YEQLVQLDPV LQPFIWNKSH IRRNLLHILR 120
  121 LSDNNGSEGV GTKREEEPLN DELFKRICDA VEKNEQTATG LFLRDNFKID YTPPMTLKSL 180
  181 QKEEEREQEQ HIPQLLMADF TSMDEESLRQ YHDTLCQSID FLVSKSRSLK KQQRDLLKDK 240
  241 TTFENVVTNL TGHTQRLQRD EIALYNKKRN KKKRFSWVGY 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle