| Protein: | LDB7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 145 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LDB7.
| Description | E-value | Query Range |
Subject Range |
|
|
209.0 | [0..1] | [105..1] |
|
|
84.0 | [0..6] | [105..3] |
|
|
69.0 | [0..8] | [105..7] |
|
|
61.0 | [0..6] | [109..1] |
|
Region A: Residues: [1-145] |
1 11 21 31 41 51
| | | | | |
1 MSGSNMGYYD VLAGLSALEK SSQVVFSATE LQQLTQQSHA TDKGIEGSEN SKAKVSKPKR 60
61 VAVHGYLGGK VSLADAAQVE YEVGHSLLGS YVPRQQLEAL SSVDLFAPFP PHIRMQSCSR 120
121 DTRCFSCRRR TIVSTLPITH REPQE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.691 | a.71.1 | Endoplasmic reticulum protein ERP29, C-domain |
| View | Download | 0.589 | d.110.4 | SNARE-like |
| View | Download | 0.589 | d.110.4 | SNARE-like |
| View | Download | 0.536 | a.1.1 | Globin-like |
| View | Download | 0.536 | a.1.1 | Globin-like |
| View | Download | 0.515 | a.1.1 | Globin-like |
| View | Download | 0.445 | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
| View | Download | 0.445 | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
| View | Download | 0.356 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.349 | d.216.1 | Rotavirus NSP2 fragment, N-terminal domain |
| View | Download | 0.341 | a.26.1 | 4-helical cytokines |
| View | Download | 0.339 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.334 | a.74.1 | Cyclin-like |
| View | Download | 0.300 | d.110.4 | SNARE-like |
| View | Download | 0.290 | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.265 | a.118.8 | TPR-like |
| View | Download | 0.229 | a.126.1 | Serum albumin-like |
| View | Download | 0.222 | c.36.1 | Thiamin diphosphate-binding fold (THDP-binding) |
| View | Download | 0.214 | a.167.1 | Porin chaperone SurA, peptide-binding domain |
| View | Download | 0.212 | c.23.1 | CheY-like |
| View | Download | 0.212 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.208 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.206 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.201 | a.146.1 | Telomeric repeat binding factor (TRF) dimerisation domain |
