YRC Public Data Repository - Protein Structure Prediction

Protein:	ECM15
Organism:	Saccharomyces cerevisiae
Length:	104 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECM15.

Description	E-value	Query Range	Subject Range
gi\|25489859 - pir\|\|E83829 hypothetical protein BH1437 [imported] - Bacillus halodurans (strain C-125) gi\|10174054, gi\|... - gi\|15614000\|ref\|NP_242303.1\| hypothetical protein BH1437 [Bacillus halodurans C-125], gi\|10174054\|db...	2.0E-32	[5..102]	[252..351]
DGLA_STAXY - UPF0045 protein in glkA 3'region OS=Staphylococcus xylosus GN=dglA PE=3 SV=1	1.0E-29	[5..103]	[1..103]
gi\|7450728 - pir\|\|S74554 hypothetical protein sll0230 - Synechocystis sp. (strain PCC 6803) Y230_SYNY3 - UPF0045 protein sll0230 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0230 PE=3 SV=1 Y230_SYNY3 - UPF0045 protein sll0230 OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / N-1) GN=sll0230 PE=3 SV...	4.0E-28	[4..99]	[21..115]
gi\|87202911, gi\|... - gi\|88195353\|ref\|YP_500157.1\| hypothetical protein SAOUHSC_01645 [Staphylococcus aureus subsp. aureus... gi\|253314917 - gi\|253314917\|ref\|ZP_04838130.1\| hypothetical protein SauraC_01830 [Staphylococcus aureus subsp. aure... gi\|87161624, gi\|... - gi\|87161624\|ref\|YP_494201.1\| hypothetical protein SAUSA300_1506 [Staphylococcus aureus subsp. aureus... gi\|251801990, gi... - gi\|251814542\|ref\|ZP_04829015.1\| protein of hypothetical function DUF77 [Staphylococcus aureus subsp.... gi\|150374462, gi... - gi\|151221662\|ref\|YP_001332484.1\| hypothetical protein NWMN_1450 [Staphylococcus aureus subsp. aureus... gi\|227899942, gi... - gi\|227899942\|ref\|ZP_04017747.1\| protein of hypothetical function DUF77 [Staphylococcus aureus subsp.... gi\|156979864, gi... - gi\|156979864\|ref\|YP_001442123.1\| hypothetical protein SAHV_1533 [Staphylococcus aureus subsp. aureus... gi\|227245876, gi... - gi\|227557744\|ref\|ZP_03987791.1\| protein of hypothetical function DUF77 [Staphylococcus aureus subsp.... gi\|87161624\|ref\|... - conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300], hypothetical protein SA... gi\|57651939, gi\|... - gi\|57651939\|ref\|YP_186443.1\| hypothetical protein SACOL1603 [Staphylococcus aureus subsp. aureus COL... gi\|21283227, gi\|... - gi\|21283227\|ref\|NP_646315.1\| hypothetical protein MW1498 [Staphylococcus aureus subsp. aureus MW2], ... gi\|90582233, gi\|... - gi\|90582233\|ref\|ZP_01237997.1\| Protein of unknown function DUF77 [Staphylococcus aureus subsp. aureu... gi\|49483795, gi\|... - gi\|49483795\|ref\|YP_041019.1\| hypothetical protein SAR1623 [Staphylococcus aureus subsp. aureus MRSA2... gi\|147741099, gi... - gi\|90585160\|ref\|ZP_01240871.1\| Protein of unknown function DUF77 [Staphylococcus aureus subsp. aureu... gi\|25328802 - pir\|\|A89935 conserved hypothetical protein SA1376 [imported] - Staphylococcus aureus (strain N315) gi\|161509775, gi... - gi\|161509775\|ref\|YP_001575434.1\| hypothetical protein USA300HOU_1548 [Staphylococcus aureus subsp. a... gi\|13701344, gi\|... - gi\|15927126\|ref\|NP_374659.1\| hypothetical protein SA1376 [Staphylococcus aureus subsp. aureus N315],... gi\|49244825, gi\|... - gi\|49486382\|ref\|YP_043603.1\| hypothetical protein SAS1484 [Staphylococcus aureus subsp. aureus MSSA4... gi\|15924536, gi\|... - gi\|15924536\|ref\|NP_372070.1\| hypothetical protein SAV1546 [Staphylococcus aureus subsp. aureus Mu50]... gi\|221137855 - gi\|221137855\|ref\|ZP_03562657.1\| hypothetical protein SauraJK_04223 [Staphylococcus aureus subsp. aur... gi\|221140034 - gi\|221140034\|ref\|ZP_03564527.1\| hypothetical protein SauraJ_00190 [Staphylococcus aureus subsp. aure... gi\|269203174\|ref... - hypothetical protein SAAV_1538 [Staphylococcus aureus subsp. aureus ED98] gi\|255006332 - gi\|255006332\|ref\|ZP_05144933.2\| hypothetical protein SauraM_07685 [Staphylococcus aureus subsp. aure... gi\|253733204, gi... - gi\|253733204\|ref\|ZP_04867369.1\| protein of hypothetical function DUF77 [Staphylococcus aureus subsp.... gi\|253723988, gi... - gi\|253732199\|ref\|ZP_04866364.1\| protein of hypothetical function DUF77 [Staphylococcus aureus subsp....	4.0E-27	[5..102]	[1..102]
ECM15 - Non-essential protein of unknown function, likely exists as tetramer, may be regulated by the bindin... gi\|151946394 - gi\|151946394\|gb\|EDN64616.1\| conserved protein [Saccharomyces cerevisiae YJM789] gi\|190408828 - gi\|190408828\|gb\|EDV12093.1\| protein ECM15 [Saccharomyces cerevisiae RM11-1a] ECM15_YEAST - UPF0045 protein ECM15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM15 PE=1 SV=1	4.0E-27	[1..104]	[1..104]
gi\|15607034, gi\|... - gi\|2984298\|gb\|AAC07822.1\| hypothetical protein aq_2067 [Aquifex aeolicus VF5], gi\|15607034\|ref\|NP_21... gi\|7450731 - pir\|\|C70477 conserved hypothetical protein aq_2067 - Aquifex aeolicus	2.0E-26	[4..104]	[46..145]
Y1187_METTH - UPF0045 protein MTH_1187 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / J... gi\|7450729 - pir\|\|C69025 conserved hypothetical protein MTH1187 - Methanobacterium thermoautotrophicum (strain De...	6.0E-26	[5..102]	[1..99]
gi\|25328800 - pir\|\|G97242 uncharacterized conserved protein, YQGV B. subtilis ortholog CAC2786 [imported] - Clostr... gi\|15025825, gi\|... - gi\|15896041\|ref\|NP_349390.1\| hypothetical protein CAC2786 [Clostridium acetobutylicum ATCC 824], gi\|...	1.0E-25	[5..103]	[1..100]
gi\|14521880, gi\|... - gi\|5459100\|emb\|CAB50586.1\| Hypothetical protein [Pyrococcus abyssi GE5], gi\|14521880\|ref\|NP_127356.1... gi\|7450732, gi\|5... - pir\|\|D75018 hypothetical protein PAB1240 - Pyrococcus abyssi (strain Orsay), gi\|5459100\|emb\|CAB50586...	4.0E-25	[4..102]	[1..98]
gi\|14591649, gi\|... - gi\|3258346\|dbj\|BAA31029.1\| 106aa long hypothetical protein [Pyrococcus horikoshii OT3], gi\|14591649\|... gi\|7450733 - pir\|\|F71204 hypothetical protein PH1904 - Pyrococcus horikoshii	8.0E-24	[1..102]	[1..101]

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Predicted Domain #1

Region A:
Residues: [1-104]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKIFCLADV CMVPIGTDSA SISDFVALIE KKIRESPLKS TLHSAGTTIE GPWDDVMGLI  60
   61 GEIHEYGHEK GYVRVHTDIR VGTRTDKHQT AQDKIDVVLK KISQ

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	51.420216
Match:	PF01910
Description:	Domain of unknown function DUF77

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.806	0.871	cellular cell wall organization	d.58.48	MTH1187-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits