YRC Public Data Repository - Protein Structure Prediction

Protein:	YHR214W, YAR066W
Organism:	Saccharomyces cerevisiae
Length:	203 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHR214W, YAR066W.

Description	E-value	Query Range	Subject Range
YA066_YEAST, YH2... - Putative GPI-anchored protein YHR214W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YH... gi\|151944205, gi... - gi\|151944205\|gb\|EDN62493.1\| conserved protein [Saccharomyces cerevisiae YJM789], gi\|151941417\|gb\|EDN... gi\|190405988 - gi\|190405988\|gb\|EDV09255.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi\|207347945 - gi\|207347945\|gb\|EDZ73957.1\| YAR066Wp-like protein [Saccharomyces cerevisiae AWRI1631] YHR214W, YAR066W - Putative protein of unknown function; predicted to be a glycosylphosphatidylinositol-modified (GPI) ...	1.0E-66	[1..203]	[1..203]

Back

Predicted Domain #1

Region A:
Residues: [1-203]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNRFNKFQA AVALALLSRG ALGDSYTNST SSADLSSITS VSSASASATA SDSLSSSDGT  60
   61 VYLPSTTISG DLTVTGKVIA TEAVEVAAGG KLTLLDGEKY VFSSDLKVHG DLVVEKSEAS 120
  121 YEGTAFDVSG ETFEVSGNFS AEETGAVSAS IYSFTPSSFK SSGDISLSLS KAKKGEVTFS 180
  181 PYSNAGTFSL SNAILNGGSV SGL

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits