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View Structure Prediction Details

Protein: FLO1
Organism: Saccharomyces cerevisiae
Length: 1537 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLO1.

Description E-value Query
Range		 Subject
Range
SPBPJ4664.02 - glycoprotein
YHU2_SCHPO - Uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02 OS=Schizosaccharomyces pombe (str...
 0.0 [5..1534] [777..2322]
gi|1346018, gi|5... - gi|535934|emb|CAA55024.1| flocculation FL01 [Saccharomyces cerevisiae], gi|1346018|sp|P32768|FLO1_YE...
 0.0 [1..1537] [1..1537]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 5.0E-93 [1..1367] [1..1353]
gi|10952736 - gi|10952736|gb|AAG25054.1| agglutinin-like protein [Candida albicans]
 1.0E-82 [47..1532] [13..1463]
gi|10944943 - gi|10944943|emb|CAC14137.1| MUC4 protein splice variant sv15 [Homo sapiens]
 2.0E-81 [218..1375] [27..1188]

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Predicted Domain #1
Region A:
Residues: [1-259] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMPHRYMFL AVFTLLALTS VASGATEACL PAGQRKSGMN INFYQYSLKD SSTYSNAAYM  60
   61 AYGYASKTKL GSVGGQTDIS IDYNIPCVSS SGTFPCPQED SYGNWGCKGM GACSNSQGIA 120
  121 YWSTDLFGFY TTPTNVTLEM TGYFLPPQTG SYTFKFATVD DSAILSVGGA TAFNCCAQQQ 180
  181 PPITSTNFTI DGIKPWGGSL PPNIEGTVYM YAGYYYPMKV VYSNAVSWGT LPISVTLPDG 240
  241 TTVSDDFEGY VYSFDDDLS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [260-316] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSNCTVPDPS NYAVSTTTTT TEPWTGTFTS TSTEMTTVTG TNGVPTDETV IVIRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.148742
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [317-361] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TASTIITTTE PWNSTFTSTS TELTTVTGTN GVRTDETIIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.886057
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [362-406] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TATTAITTTE PWNSTFTSTS TELTTVTGTN GLPTDETIIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.167491
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [407-451] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TATTAMTTTQ PWNDTFTSTS TELTTVTGTN GLPTDETIIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.657577
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [452-496] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TATTAMTTTQ PWNDTFTSTS TELTTVTGTN GLPTDETIIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.657577
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [497-541] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TATTAMTTTQ PWNDTFTSTS TEITTVTGTN GLPTDETIIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.236572
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [542-586] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TATTAMTTPQ PWNDTFTSTS TEMTTVTGTN GLPTDETIIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.229148
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #9
Region A:
Residues: [587-631] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TATTAITTTE PWNSTFTSTS TEMTTVTGTN GLPTDETIIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.508638
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #10
Region A:
Residues: [632-676] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TATTAITTTQ PWNDTFTSTS TEMTTVTGTN GLPTDETIIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.677781
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #11
Region A:
Residues: [677-721] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TATTAMTTTQ PWNDTFTSTS TEITTVTGTT GLPTDETIIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 20.337242
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #12
Region A:
Residues: [722-766] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TATTAMTTTQ PWNDTFTSTS TEMTTVTGTN GVPTDETVIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.958607
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #13
Region A:
Residues: [767-811] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGLISTTTE PWTGTFTSTS TEMTTVTGTN GQPTDETVIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.769551
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #14
Region A:
Residues: [812-856] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGLVTTTTE PWTGTFTSTS TEMTTITGTN GVPTDETVIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.886057
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #15
Region A:
Residues: [857-901] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGLISTTTE PWTGTFTSTS TEMTTITGTN GQPTDETVIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.60206
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #16
Region A:
Residues: [902-946] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGLISTTTE PWTGTFTSTS TEMTHVTGTN GVPTDETVIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.013228
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #17
Region A:
Residues: [947-991] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGLISTTTE PWTGTFTSTS TEVTTITGTN GQPTDETVIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.920819
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #18
Region A:
Residues: [992-1036] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGLISTTTE PWTGTFTSTS TEMTTVTGTN GQPTDETVIV IRTPT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.769551
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #19
Region A:
Residues: [1037-1094] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGLVTTTTE PWTGTFTSTS TEMSTVTGTN GLPTDETVIV VKTPTTAISS SLSSSSSG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 21.958607
Match: PF00624
Description: Flocculin repeat

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #20
Region A:
Residues: [1095-1184] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QITSSITSSR PIITPFYPSN GTSVISSSVI SSSVTSSLFT SSPVISSSVI SSSTTTSTSI  60
   61 FSESSKSSVI PTSSSTSGSS ESETSSAGSV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score		 SCOP
Match		 SCOP Description
View Download 0.418 a.35.1 lambda repressor-like DNA-binding domains
View Download 0.358 d.95.2 Homing endonucleases
View Download 0.299 d.129.1 TATA-box binding protein-like
View Download 0.408 a.135.1 Tetraspanin
View Download 0.431 d.31.1 Cdc48 domain 2-like
View Download 0.289 d.15.11 Doublecortin (DC)
View Download 0.280 a.118.14 FliG
View Download 0.248 b.49.1 N-terminal domain of alpha and beta subunits of F1 ATP synthase
View Download 0.226 d.42.1 POZ domain
View Download 0.224 a.60.4 DNA repair protein Rad51, N-terminal domain
View Download 0.218 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.210 c.51.1 Anticodon-binding domain of Class II aaRS
View Download 0.209 d.74.2 C-terminal domain of arginine repressor

Predicted Domain #21
Region A:
Residues: [1185-1537] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSSSFISSES SKSPTYSSSS LPLVTSATTS QETASSLPPA TTTKTSEQTT LVTVTSCESH  60
   61 VCTESISPAI VSTATVTVSG VTTEYTTWCP ISTTETTKQT KGTTEQTTET TKQTTVVTIS 120
  121 SCESDVCSKT ASPAIVSTST ATINGVTTEY TTWCPISTTE SRQQTTLVTV TSCESGVCSE 180
  181 TASPAIVSTA TATVNDVVTV YPTWRPQTAN EESVSSKMNS ATGETTTNTL AAETTTNTVA 240
  241 AETITNTGAA ETKTVVTSSL SRSNHAETQT ASATDVIGHS SSVVSVSETG NTKSLTSSGL 300
  301 STMSQQPRST PASSMVGYST ASLEISTYAG SANSLLAGSG LSVFIASLLL AII

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle