| Protein: | PRM9 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 298 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRM9.
| Description | E-value | Query Range |
Subject Range |
|
|
475.0 | [0..1] | [298..1] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MSPQYHFYFV SFRNLVLNEK CLRSKKQVMK SFNWYKTDRY FDPHNILQHH SRAIEKTRYK 60
61 LGMQTSSEST DAKSDFLDEP SAYLIEKNVA LPKDIFGSYL SYWIYEVTRH KAAVILLVLI 120
121 VTSIL
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.493 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.391 | N/A | N/A | a.244.1 | Description not found. |
| View | Download | 0.369 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.339 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.339 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.312 | N/A | N/A | d.58.39 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| View | Download | 0.304 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.304 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.276 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.252 | N/A | N/A | a.24.11 | Bacterial GAP domain |
|
Region A: Residues: [126-298] |
1 11 21 31 41 51
| | | | | |
1 LLVFFYNTEF CVAFEILLFS FCFPGTCMVV IAFSEPIGDR EFKVKLLMEI ITRKPAVKGK 60
61 EWRTITYKMN QYLFDHGLWD TPYYFYRDED CHRYFLSLIK GRTFKKQKES SASNVKDAQS 120
121 NDETAGTPNE AAESSSFSAG PNFIKLLTKA AEIEQQFQKE YWRQEYPGVD EFF
|
| Detection Method: | |
| Confidence: | 53.744727 |
| Match: | PF00674 |
| Description: | DUP family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.453 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.396 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.261 | N/A | N/A | a.25.1 | Ferritin-like |
