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View Structure Prediction Details

Protein: YAR023C
Organism: Saccharomyces cerevisiae
Length: 179 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAR023C.

Description E-value Query
Range
Subject
Range
YAR023C - Putative integral membrane protein, member of DUP240 gene family
1.0E-60 [1..179] [1..179]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINFLLFVLT ILATLTNIWV SGVLSPAMVI RICLGGSMVV LQIWSISRPI SNETFRTKLL  60
   61 LEVITHRPSI AGKEWKTITY NMNQYLFKAG LWKTPYHFFC EHQCYEFFKD LIKGKYPDVQ 120
  121 WDTANTQPFI SVPENQAATQ NSDVEPTVKW CLFKAAEIQA HAVREYWQSQ YPDVGIPAI

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Detection Method: Pfam
Confidence: 55.004365
Match: PF00674
Description: DUP family

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle