YRC Public Data Repository - Protein Structure Prediction

Protein:	PAU7
Organism:	Saccharomyces cerevisiae
Length:	55 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAU7.

Description	E-value	Query Range	Subject Range
PAU22_YEAST, PAU... - Seripauperin-22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAU22 PE=3 SV=1, Seripau... PAU21, PAU22 - Protein of unknown function, member of the seripauperin multigene family encoded mainly in subtelome... gi\|190407682 - gi\|190407682\|gb\|EDV10949.1\| protein PAU3 [Saccharomyces cerevisiae RM11-1a]	71.0	[0..1]	[55..41]

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Predicted Domain #1

Region A:
Residues: [1-55]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLTSIAAG VAAIAAGASA AATTTLSQSD ERVNLVELGV YVSDIRAHLA EYYSF

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits