YRC Public Data Repository - Protein Structure Prediction

Protein:	YAL065C
Organism:	Saccharomyces cerevisiae
Length:	128 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAL065C.

Description	E-value	Query Range	Subject Range
FLO9 - Lectin-like protein with similarity to Flo1p, thought to be expressed and involved in flocculation FLO9_YEAST - Flocculation protein FLO9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FLO9 PE=3 SV=2	136.0	[0..1]	[127..1196]

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Predicted Domain #1

Region A:
Residues: [1-128]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSATSETTT NTGAAETTTS TGAAETKTVV TSSISRFNHA ETQTASATDV IGHSSSVVSV  60
   61 SETGNTKSLI TSGLSTMSQQ PRSTPASSII GSSTASLEIS TYVGIANGLL TNNGISVFIS 120
  121 TVLLAIVW

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Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits