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View Structure Prediction Details

Protein: ECM1
Organism: Saccharomyces cerevisiae
Length: 212 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ECM1.

Description E-value Query
Range
Subject
Range
ECM1 - Pre-ribosomal factor involved in 60S ribosomal protein subunit export; associates with the pre-60S p...
0.0 [1..212] [1..212]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWEQRRQKVV FSLTILVRYR LKQSMAKKIS KNSRAARQSD ALEPEVKDLS ELPRAEKTDL  60
   61 TNILIRTAAK NEALLEAKIS KKANKSKRGK KLNKKALEDK LDNSISSMDR DRLVKALNFT 120
  121 NRLDGKIAKS ISRAKYIQNT RKAGWDSTNE TIKKELAFLN GGLSVQAKSA SEGNAEKEDE 180
  181 EIPEVFDSLA EDNTVQKTPT NRFGVLPDDV EE

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle