YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: OAF1
Organism: Saccharomyces cerevisiae
Length: 1062 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OAF1.

Description E-value Query
Range
Subject
Range
OAF1 - Oleate-activated transcription factor, acts alone and as a heterodimer with Pip2p; activates genes i...
1204.0 [0..1] [1041..1]
gi|49529191 - gi|49529191|emb|CAG62857.1| unnamed protein product [Candida glabrata]
gi|50294932, gi|... - gi|50294932|ref|XP_449877.1| hypothetical protein CAGL0M12298g [Candida glabrata CBS138], gi|4952919...
636.0 [0..40] [1041..1]
gi|499202 - gi|499202|gb|AAA19010.1| transcription factor [Schizosaccharomyces pombe]
398.0 [0..52] [710..25]
SPAC3C7.04 - transcription factor
YF54_SCHPO - Uncharacterized transcriptional regulatory protein C3C7.04 OS=Schizosaccharomyces pombe (strain 972 ...
395.0 [0..65] [717..39]
gi|44983119, gi|... - gi|45188275|ref|NP_984498.1| ADR403Cp [Ashbya gossypii ATCC 10895], gi|44983119|gb|AAS52322.1| ADR40...
gi|44983119 - gi|44983119|gb|AAS52322.1| ADR403Cp [Ashbya gossypii ATCC 10895]
346.0 [0..39] [1041..6]

Back

Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVENSTQKAP HAGNDDNSST KPYSEAFFLG FNNPTPGLEA EHSSTSPAPE NSETHNRKRN  60
   61 RILFVCQACW KSKTKCDREK PECGRCVKHG LKCVYDVSKQ PAPRIPSKDA IISRLEKDMF 120
  121 YWKDKAMKLL TEREVNESGK RSASPINTNN ASGDSPDTKK QHKMEPIYEQ SGNGDINN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.54902
Match: 1hwtC
Description: Hap1 (Cyp1); HAP1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [179-319]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTRNDIEINL YRSHPTMIMS KVMKREVKPL SENYIIIQDC FLKILVTSVF LDTSKNTMIP  60
   61 ALTANANITR AQPSVANNLL KLKEMLIRQC QTEDEKNRVN EFTDRILQNT NSNRNLKIGM 120
  121 LLSMLYNSVG YQYLEDHCPQ G

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [320-661]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEYSDLLRNL INECEAILPS YEIIERYKNH FYEYVYPSLP FIELEIFEES LSQTIFPDPN  60
   61 NPSKVQIRMG STHLRAKVEN LSLLLVILKL SYMSIRFLDH STADSSFYLS KEIIDKYPIP 120
  121 NDFILLSPRC LASENWCACA NENIISCLLY IWSFFAFSPE EGDFFLEHPT DVISSLIMML 180
  181 STSIGLHRDP SDFPQLISPS TSDKRTLNHR RILWLSIVTV CSFEASLKGR HSVSPISLMA 240
  241 LFLNIKDPDS LTVYMNRVRG DLSDINNHTL LRIHKFTFKR AQLALLLSDL DNLTMTYYGS 300
  301 FHLHSIEFIR EKIEIFVEEN FPIVPLKSVA QDKSDLDDMN VI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [662-1062]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEMNILSSEN SSSFHNRIMN KLLMLRTSMA VFLHFETLIT KDKSIFPFYK KYFMVSCMDA  60
   61 LSLINYFNKF FNGEYRHAIS SLTSFNVTKF IQLALSSTIF SLLGIILRIG LAIHMLSSEV 120
  121 QKLSGTTDPR IKELNTKVEK FSTLQRDLES ALEGIYCSAS EHLRFTYFPV FKMLALFDVI 180
  181 VQRMRKGELW HGIFTMIQME QMHSRIIKTL SITLGVKLDK KDRLLEELMA CNHVANFSVE 240
  241 DIDELNRNIK KEIQISSGLK PPVNTIDLTN GEPFGNAVPT FTKTWSSSLD NLEKLSSAAA 300
  301 VGQSLDYNSG LRQGPLAGGG SKEQTPIAGM NNLNNSINAT PIVDNSSGSQ LPNGFDRGQA 360
  361 NNTPFPGYFG GLDLFDYDFL VWAMTLLKNF LSKLLPIHFI N

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle