Protein: | PTA1 |
Organism: | Saccharomyces cerevisiae |
Length: | 785 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTA1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..785] | [1..785] |
|
0.0 | [102..784] | [1..607] |
|
0.0 | [2..555] | [6..442] |
|
1.0E-78 | [3..282] | [27..319] |
Region A: Residues: [1-261] |
1 11 21 31 41 51 | | | | | | 1 MSSAEMEQLL QAKTLAMHNN PTEMLPKVLE TTASMYHNGN LSKLKLPLAK FFTQLVLDVV 60 61 SMDSPIANTE RPFIAAQYLP LLLAMAQSTA DVLVYKNIVL IMCASYPLVL DLVAKTSNQE 120 121 MFDQLCMLKK FVLSHWRTAY PLRATVDDET DVEQWLAQID QNIGVKLATI KFISEVVLSQ 180 181 TKSPSGNEIN SSTIPDNHPV LNKPALESEA KRLLDMLLNY LIEEQYMVSS VFIGIINSLS 240 241 FVIKRRPQTT IRILSGLLRF N |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [262-505] |
1 11 21 31 41 51 | | | | | | 1 VDAKFPLEGK SDLNYKLSKR FVERAYKNFV QFGLKNQIIT KSLSSGSGSS IYSKLTKISQ 60 61 TLHVIGEETK SKGILNFDPS KGNSKKTLSR QDKLKYISLW KRQLSALLST LGVSTKTPTP 120 121 VSAPATGSST ENMLDQLKIL QKYTLNKASH QGNTFFNNSP KPISNTYSSV YSLMNSSNSN 180 181 QDVTQLPNDI LIKLSTEAIL QMDSTKLITG LSIVASRYTD LMNTYINSVP SSSSSKRKSD 240 241 DDDD |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [506-785] |
1 11 21 31 41 51 | | | | | | 1 GNDNEEVGND GPTANSKKIK METEPLAEEP EEPEDDDRMQ KMLQEEESAQ EISGDANKST 60 61 SAIKEIAPPF EPDSLTQDEK LKYLSKLTKK LFELSGRQDT TRAKSSSSSS ILLDDDDSSS 120 121 WLHVLIRLVT RGIEAQEASD LIREELLGFF IQDFEQRVSL IIEWLNEEWF FQTSLHQDPS 180 181 NYKKWSLRVL ESLGPFLENK HRRFFIRLMS ELPSLQSDHL EALKPICLDP ARSSLGFQTL 240 241 KFLIMFRPPV QDTVRDLLHQ LKQEDEGLHK QCDSLLDRLK |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.