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View Structure Prediction Details

Protein: CYC3
Organism: Saccharomyces cerevisiae
Length: 269 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYC3.

Description E-value Query
Range
Subject
Range
CYC3 - Cytochrome c heme lyase (holocytochrome c synthase), attaches heme to apo-cytochrome c (Cyc1p or Cyc...
CCHL_YEAST - Cytochrome c heme lyase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CYC3 PE=1 SV=1
gi|190406689 - gi|190406689|gb|EDV09956.1| cytochrome c heme lyase [Saccharomyces cerevisiae RM11-1a]
0.0 [1..269] [1..269]
CCHL_CANAL - Cytochrome c heme lyase OS=Candida albicans GN=CYC3 PE=3 SV=1
4.0E-92 [1..254] [1..250]
cchl-1 - cyctochrome c1 heme lyase status:Confirmed UniProt:P53703 protein_id:CAA88969.1
2.0E-79 [18..251] [28..250]
CCHL_NEUCR - Cytochrome c heme lyase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257...
CCHL_NEUCR - Cytochrome c heme lyase OS=Neurospora crassa GN=cyt-2 PE=3 SV=1
2.0E-73 [1..254] [1..326]
SPAC24C9.02c - cytochrome c1 heme lyase
YE42_SCHPO - Putative cytochrome c1 heme lyase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24C9...
3.0E-61 [40..260] [12..212]

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Predicted Domain #1
Region A:
Residues: [1-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGWFWADQKT TGKDIGGAAV SSMSGCPVMH ESSSSSPPSS ECPVMQGDND RINPLNNMPE  60
   61 LAASKQPGQK MDLPVDRTIS SIPKSPDSNE FWEYPSPQQM YNAMVRKGKI GGSGEVAEDA 120
  121 VESMVQVHNF LNEGCWQEVL EWEKPHTDES HVQPKLLKFM GKPGVLSPRA RWMHLCGLLF 180
  181 PSHFSQELPF DRHDWIVLRG ERKAEQQPPT FKEVRYVLDF YGGPDDENGM PTFHVDVRPA 240
  241 LDSLDNAKDR MTRFLDRMIS GPSSSSSAP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 171.522879
Match: PF01265
Description: Cytochrome c/c1 heme lyase

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle