| Protein: | GIP4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 760 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GIP4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..760] | [1..760] |
|
|
5.0E-47 | [312..734] | [3828..4266] |
|
|
6.0E-37 | [406..709] | [1138..1428] |
|
|
9.0E-37 | [406..709] | [1146..1436] |
|
|
9.0E-36 | [375..754] | [950..1350] |
|
|
6.0E-34 | [411..728] | [86..382] |
|
|
1.0E-32 | [408..737] | [489..830] |
|
|
4.0E-31 | [416..690] | [1040..1323] |
|
Region A: Residues: [1-444] |
1 11 21 31 41 51
| | | | | |
1 MVDVQKRKKL LAKAAASASI PAIKGSVPLD SYDIKIIQYK NALYKLNELN RLLNVLVPHL 60
61 KKKRDNDESY KIIPLVNFIL SLCEGPIFNV SPVLAKRYHL LCRFQLIKLS EVQQRLSTNF 120
121 IDVEGWMFPE EVPLDHYKSC IYNNSLQWKI LNSLSCIAQN AIKIYNAKLR QILLERDAYK 180
181 ARSLPFDTSI IEDLLNPVEM TLILDLAVLI NDPVRDKSTH SFYKLQWQVM EKLNSCVHSK 240
241 IFPILRTYYN QLQKFSETRP TSLSNLQKDL PHWEWTLHRI YTFHLRVFSV LCVIISFSRQ 300
301 IFLPNKQHFL DIKTRLSSEN VYHYDLIICE LMALLSPECD DVTALFELQE NLKFWTQTAR 360
361 TDNNSSRTPI FHLQPGLVVE LFNNHICKII PKLRSIMGLL SNWMDCWKYI EKNYKTFDET 420
421 NDLRENLKEK LERDKALYLE VKNA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [445-498] |
1 11 21 31 41 51
| | | | | |
1 KSKLKKKPSI TKLPASSSPS PSPTSSASPS RQASLESIRT RARAHLASNS SRSP
|
| Detection Method: | |
| Confidence: | 14.99 |
| Match: | 1ldvA |
| Description: | No description for 1ldvA was found. |
|
Region A: Residues: [499-760] |
1 11 21 31 41 51
| | | | | |
1 SVSPVRTTFN NKNAETKKSV VSPEKRKLIN GRRPRSSSLQ SYTNKQQTSY LNSTRHPSIA 60
61 PPSKLNNQRS NSLQSSTMTL NQKIVQDTVR HLMNKSASTP NPSASSSLAP SPKVSSINNT 120
121 SSGKSSSTLI ANSSDTLAIE TLTLDPESNS SELSIKRVRF AGVPPMTEAE NPKPTKVGWY 180
181 KKPAVLHYPP IPASAMIKPL QHKSKYNTLR QEEGFTFRKS LRDGLEWENG ESGSETTMMP 240
241 FGIEIKESTG HRIASKIRSK LR
|
| Detection Method: | |
| Confidence: | 8.52 |
| Match: | 1ei3A |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
