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View Structure Prediction Details

Protein: SAW1
Organism: Saccharomyces cerevisiae
Length: 261 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAW1.

Description E-value Query
Range
Subject
Range
SAW1 - Protein involved in Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during double-strand br...
SAW1_YEAST - Single-strand annealing weakened protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ...
gi|207348018 - gi|207348018|gb|EDZ74001.1| YAL027Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|190406675 - gi|190406675|gb|EDV09942.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
0.0 [1..261] [1..261]

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Predicted Domain #1
Region A:
Residues: [1-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSIATVKI ARDMVLPLRI FVNRKQILQT NDKTSNKSNA TIFEAPLLSN NSIICLKSPN  60
   61 TRIYLSQQDK KNLCDEIKED LLLIVYELAS PEIISSVLSK IRVGHSTDFQ INVLPKLFAG 120
  121 ADTDNAVTSH IQSVTRLAKF KYKLHYKHKW ELDIFINSIK KIANLRHYLM FQTLTLNGFS 180
  181 LNAGPKTLLA RKIEKQPQVP NLLIENGDAD ALDTPVEEDI KPVIEFMYKP VINLGEIIDV 240
  241 HVLHRPRRHK VRTQSKQPQE E

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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