| Protein: | DEP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 362 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DEP1.
| Description | E-value | Query Range |
Subject Range |
|
|
533.0 | [0..1] | [334..1] |
|
|
219.0 | [0..170] | [324..304] |
|
|
216.0 | [0..1] | [324..174] |
|
|
201.0 | [0..172] | [334..358] |
|
|
195.0 | [0..100] | [277..4] |
|
|
177.0 | [0..102] | [212..5] |
|
|
125.0 | [0..90] | [317..15] |
|
|
123.0 | [0..88] | [305..195] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MSQQTPQESE QTTAKEQDLD QESVLSNIDF NTDLNHNLNL SEYCISSDAG TEKMDSDEEK 60
61 SLANLPELKY APKLSSLVKQ ETLTESLKRP HEDEKEAIDE AKKMKVPGEN EDESKEEEKS 120
121 QELEEAIDSK EKSTDARDEQ GDEGDNEEEN NEEDNENENE HT
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [163-362] |
1 11 21 31 41 51
| | | | | |
1 APPALVMPSP IEMEEQRMTA LKEITDIEYK FAQLRQKLYD NQLVRLQTEL QMCLEGSHPE 60
61 LQVYYSKIAA IRDYKLHRAY QRQKYELSCI NTETIATRTF IHQDFHKKVT DLRARLLNRT 120
121 TQTWYDINKE RRDMDIVIPD VNYHVPIKLD NKTLSCITGY AAHDSCAIPA SPWQRTSLAK 180
181 ASSTATEPTR WTNSKSLWTE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.975 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.960 | a.216.1 | Description not found. |
| View | Download | 0.955 | a.87.1 | DBL homology domain (DH-domain) |
| View | Download | 0.951 | a.87.1 | DBL homology domain (DH-domain) |
| View | Download | 0.946 | a.47.2 | t-snare proteins |
| View | Download | 0.946 | a.47.2 | t-snare proteins |
| View | Download | 0.943 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.937 | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.915 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
