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View Structure Prediction Details

Protein: ERP2
Organism: Saccharomyces cerevisiae
Length: 215 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERP2.

Description E-value Query
Range
Subject
Range
gi|14042242 - gi|14042242|dbj|BAB55166.1| unnamed protein product [Homo sapiens]
7.0E-57 [14..212] [19..217]
TMED4_MOUSE - Transmembrane emp24 domain-containing protein 4 OS=Mus musculus GN=Tmed4 PE=1 SV=1
2.0E-56 [17..211] [15..225]
TMEDA_MESAU - Transmembrane protein Tmp21 OS=Mesocricetus auratus GN=TMED10 PE=1 SV=1
1.0E-53 [16..211] [16..216]
TMEDA_RABIT - Transmembrane emp24 domain-containing protein 10 OS=Oryctolagus cuniculus GN=TMED10 PE=1 SV=1
2.0E-53 [16..211] [16..216]
TMEDA_RAT - Transmembrane emp24 domain-containing protein 10 OS=Rattus norvegicus GN=Tmed10 PE=1 SV=2
3.0E-53 [17..211] [1..200]
CE24533 - status:Confirmed UniProt:Q9U1Z4 protein_id:CAB60397.1
4.0E-53 [18..211] [3..209]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKSTIALPS FFIVLILALV NSVAASSSYA PVAISLPAFS KECLYYDMVT EDDSLAVGYQ  60
   61 VLTGGNFEID FDITAPDGSV ITSEKQKKYS DFLLKSFGVG KYTFCFSNNY GTALKKVEIT 120
  121 LEKEKTLTDE HEADVNNDDI IANNAVEEID RNLNKITKTL NYLRAREWRN MSTVNSTESR 180
  181 LTWLSILIII IIAVISIAQV LLIQFLFTGR QKNYV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 75.124939
Match: PF01105
Description: emp24/gp25L/p24 family/GOLD

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [146-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VEEIDRNLNK ITKTLNYLRA REWRNMSTVN STESRLTWLS ILIIIIIAVI SIAQVLLIQF  60
   61 LFTGRQKNYV 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle