| Protein: | AI1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 834 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AI1.
| Description | E-value | Query Range |
Subject Range |
|
|
708.0 | [0..1] | [834..1] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MVQRWLYSTN AKDIAVLYFM LAIFSGMAGT AMSLIIRLEL AAPGSQYLHG NSQLFNGAPT 60
61 SAYISLMRTA LVLWIINRYL KHMTNSVGAN FT
|
| Detection Method: |  |
| Confidence: | 42.522879 |
| Match: | 1occA |
| Description: | Mitochondrial cytochrome c oxidase, subunit I |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [93-666] |
1 11 21 31 41 51
| | | | | |
1 GTMACHKTPM ISVGGVKCYM VRLTNFLQVF IRITISSYHL DMVKQVWLFY VEVIRLWFIV 60
61 LDSTGSVKKM KDTNNTKGNT KSEGSTERGN SGVDRGMVVP NTQMKMRFLN QVRYYSVNNN 120
121 LKMGKDTNIE LSKDTSTSDL LEFEKLVMDN MNEENMNNNL LSIMKNVDML MLAYNRIKSK 180
181 PGNMTPGTTL ETLDGMNMMY LNKLSNELGT GKFKFKPMRM VNIPKPKGGM RPLSVGNPRD 240
241 KIVQEVMRMI LDTIFDKKMS THSHGFRKNM SCQTAIWEVR NMFGGSNWFI EVDLKKCFDT 300
301 ISHDLIIKEL KRYISDKGFI DLVYKLLRAG YIDEKGTYHK PMLGLPQGSL ISPILCNIVM 360
361 TLVDNWLEDY INLYNKGKVK KQHPTYKKLS RMIAKAKMFS TRLKLHKERA KGPTFIYNDP 420
421 NFKRMKYVRY ADDILIGVLG SKNDCKMIKR DLNNFLNSLG LTMNEEKTLI TCATETPARF 480
481 LGYNISITPL KRMPTVTKTI RGKTIRSRNT TRPIINAPIR DIINKLATNG YCKHNKNGRM 540
541 GVPTRVGRWT YEEPRTIINN YKALGRGILN YYKL
|
| Detection Method: | |
| Confidence: | 2.1 |
| Match: | 2ijd1 |
| Description: | No description for 2ijd1 was found. |
| Term | Confidence | Notes |
| DNA polymerase activity | 3.48899522091554 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 3.47530593895491 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.44935357223617 | bayes_pls_golite062009 |
| DNA binding | 1.04980164056055 | bayes_pls_golite062009 |
| catalytic activity | 0.985794797454925 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.977829931092877 | bayes_pls_golite062009 |
| nucleic acid binding | 0.916757424850137 | bayes_pls_golite062009 |
| binding | 0.826541132106647 | bayes_pls_golite062009 |
| transferase activity | 0.562916058192021 | bayes_pls_golite062009 |
| exonuclease activity | 0.478231141372817 | bayes_pls_golite062009 |
|
Region A: Residues: [667-834] |
1 11 21 31 41 51
| | | | | |
1 ATNYKRLRER IYYVLYYSCV LTLASKYRLK TMSKTIKKFG YNLNIIENDK LIANFPRNTF 60
61 DNIKKIENHG MFMYMSEAKV TDPFEYIDSI KYMLPTAKAN FNKPCSICNS TIDVEMHHVK 120
121 QLHRGMLKAT KDYITGRMIT MNRKQIPLCK QCHIKTHKNK FKNMGPGM
|
| Detection Method: | |
| Confidence: | 17.309804 |
| Match: | PF01348.12 |
| Description: | No description for PF01348.12 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
