YRC Public Data Repository - Protein Structure Prediction

Protein:	h0024586
Organism:	SPECIES UNKNOWN
Length:	256 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for h0024586.

Description	E-value	Query Range	Subject Range
MAF1 - MAF1 homolog (S. cerevisiae)	0.0	[1..256]	[1..256]
gi\|114622169 - gi\|114622169\|ref\|XP_001155989.1\| PREDICTED: MAF1 protein isoform 3 [Pan troglodytes]	0.0	[1..250]	[1..250]
gi\|109087716 - gi\|109087716\|ref\|XP_001089551.1\| PREDICTED: similar to Repressor of RNA polymerase III transcription...	0.0	[1..256]	[1..258]
MAF1_MOUSE - Repressor of RNA polymerase III transcription MAF1 homolog OS=Mus musculus GN=Maf1 PE=2 SV=1	0.0	[1..256]	[1..258]
MAF1_RAT - Repressor of RNA polymerase III transcription MAF1 homolog OS=Rattus norvegicus GN=Maf1 PE=2 SV=1	0.0	[1..256]	[1..260]
gi\|73974747, gi\|... - gi\|73974747\|ref\|XP_857738.1\| PREDICTED: similar to MAF1 protein isoform 2 [Canis familiaris], gi\|739...	0.0	[1..256]	[1..265]
MAF1_XENLA - Repressor of RNA polymerase III transcription MAF1 homolog OS=Xenopus laevis GN=maf1 PE=2 SV=1	4.0E-94	[1..218]	[1..217]
gi\|74354278, gi\|... - gi\|77735795\|ref\|NP_001029596.1\| MAF1 protein [Bos taurus], gi\|74354278\|gb\|AAI02225.1\| MAF1 homolog (...	8.0E-93	[1..206]	[1..206]
MAF1_DANRE - Repressor of RNA polymerase III transcription MAF1 homolog OS=Danio rerio GN=maf1 PE=2 SV=1	3.0E-89	[1..226]	[1..226]

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Predicted Domain #1

Region A:
Residues: [1-256]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLLENSSFE AINSQLTVET GDAHIIGRIE SYSCKMAGDD KHMFKQFCQE GQPHVLEALS  60
   61 PPQTSGLSPS RLSKSQGGEE EGPLSDKCSR KTLFYLIATL NESFRPDYDF STARSHEFSR 120
  121 EPSLSWVVNA VNCSLFSAVR EDFKDLKPQL WNAVDEEICL AECDIYSYNP DLDSDPFGED 180
  181 GSLWSFNYFF YNKRLKRIVF FSCRSISGST YTPSEAGNEL DMELGEEEVE EESRSGGSGA 240
  241 EETSTMEEDR VPVICI

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	90.60206
Match:	PF09174.1
Description:	No description for PF09174.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits