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View Structure Prediction Details

Protein: gi|79332834, gi|...
Organism: Arabidopsis thaliana
Length: 245 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|79332834, gi|....

Description E-value Query
Range
Subject
Range
gi|73952528 - gi|73952528|ref|XP_857065.1| PREDICTED: similar to ARV1 homolog isoform 2 [Canis familiaris]
203.0 [0..4] [223..40]
ARV1_BOVIN - Protein ARV1 OS=Bos taurus GN=ARV1 PE=2 SV=1
200.0 [0..2] [223..39]
gi|12006217 - gi|12006217|gb|AAG44791.1|AF271780_1 HT035 [Homo sapiens]
196.0 [0..4] [224..30]
gi|32415816, gi|... - gi|32415816|ref|XP_328386.1| predicted protein [Neurospora crassa], gi|28923925|gb|EAA33086.1| conse...
gi|85107162 - gi|85107162|ref|XP_962322.1| hypothetical protein NCU07680 [Neurospora crassa OR74A]
194.0 [0..7] [234..598]
gi|109020012 - gi|109020012|ref|XP_001106551.1| PREDICTED: similar to ARV1 homolog [Macaca mulatta]
188.0 [0..4] [196..30]
ARV1_MOUSE - Protein ARV1 OS=Mus musculus GN=Arv1 PE=2 SV=1
186.0 [0..2] [223..23]
gi|38110083, gi|... - gi|39951723|ref|XP_363578.1| hypothetical protein MG01504.4 [Magnaporthe grisea 70-15], gb|EAA55853....
185.0 [0..7] [233..3]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASEHRCVG CGFRVKSLFI QYSPGNIRLM KCGNCKEVAD EYIECERMII FIDLILHRPK  60
   61 VYRHVLYNAI NPATVNIQHL LWKLVFAYLL LDCYRSLLLR KSDEESSFSD SPVLLSIKVL 120
  121 IGVLSANAAF IISFAIATKG LLNEVS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [147-245]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRREIMLGIF ISSYFKIFLL AMLVWEFPMS VIFFVDILLL TSNSMALKVM TESTMTRCIA  60
   61 VCLIAHLIRF LVGQIFEPTI FLIQIGSLLQ YMSYFFRIV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle