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View Structure Prediction Details

Protein: gi|62321730, gi|...
Organism: Arabidopsis thaliana
Length: 224 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|62321730, gi|....

Description E-value Query
Range
Subject
Range
EBS_ARATH - Chromatin remodeling protein EBS OS=Arabidopsis thaliana GN=EBS PE=1 SV=1
168.0 [0..1] [218..1]
gi|49387718, gi|... - gi|51963770|ref|XP_506665.1| PREDICTED OSJNBa0048A13.16 gene product [Oryza sativa (japonica cultiva...
gi|218202089 - gi|218202089|gb|EEC84516.1| hypothetical protein OsI_31224 [Oryza sativa Indica Group]
159.0 [0..11] [224..3]
gi|78191416 - gi|78191416|gb|ABB29929.1| unknown [Solanum tuberosum]
145.0 [0..11] [203..3]
gi|1345528, gi|6... - pir||S44281 ES43 protein - barley, gi|1345528|emb|CAA54682.1| ES43 [Hordeum vulgare]
141.0 [0..7] [224..4]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTRPGVAS KIKTGRKELD SYTIKGTNKV VRAGDCVLMR PSDAGKPPYV ARVEKIEADA  60
   61 RNNVKVHCRW YYRPEESLGG RRQFHGAKEL FLSDHFDVQS AHTIEGKCIV HTFKNYTRLE 120
  121 NVGAEDYYCR FEYKAATGAF TPDRVAVYCK CEMPYNPDDL MVQCEGCKDW YHPACVGMTI 180
  181 EEAKKLDHFV CAECSSDDDV KKSQNGFTSS PADDVKVETK RRKR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.69897
Match: 1w4sA
Description: Crystal structure of the proximal BAH domain of polybromo
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle