| Protein: | SEC10_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 825 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEC10_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..2] | [805..1127] |
|
Region A: Residues: [1-358] |
1 11 21 31 41 51
| | | | | |
1 MTEGIRARGP RSSSVNSVPL ILDIEDFKGD FSFDALFGNL VNDLLPSFLD EEADSGDGHG 60
61 NIAGVDGLTN GHLRGQSAPL SSAPFFPEVD GLLSLFKDAC KELVDLRKQV DGRLNTLKKE 120
121 VSTQDSKHRK TLTEIEKGVD GLFESFARLD GRISSVGQTA AKIGDHLQSA DAQRETASQT 180
181 IDLIKYLMEF NGSPGDLMEL SALFSDDSRV AEAASIAQKL RSFAEEDIGR QGASAAAGNA 240
241 TPGRGLEVAV ANLQDYCNEL ENRLLSRFDA ASQRRDLSTM SECAKILSQF NRGTSAMQHY 300
301 VATRPMFIDV EVMNSDIRLV LGDHGSQPSP SNVARGLSAL FKEITDTVRK EAATITAV
|
| Detection Method: |  |
| Confidence: | 7.30103 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [359-428] |
1 11 21 31 41 51
| | | | | |
1 FPTPNEVMAI LVQRVLEQRV TGILDKILAK PSLMSPPPVQ EGGLLLYLRM LAVAYERTQE 60
61 LAKDLRAVGC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [429-825] |
1 11 21 31 41 51
| | | | | |
1 GDLDVEDLTE SLFSSHKDEY PEHERASLKQ LYQAKMEELR AESQQVSESS GTIGRSKGAS 60
61 ISSSLQQISV TVVTDFVRWN EEAITRCTLF SSQPATLAAN VKAIFTCLLD QVSVYITEGL 120
121 ERARDSLSEA AALRERFVLG RRVAAAAASA AEAAAAAGES SFKSFMVAVQ RCGSSVAIVQ 180
181 QYFANSISRL LLPVDGAHAA SCEEMSTALS KAEAAAYKGL QQCIETVMAE VDRLLSSEQK 240
241 STDYRSTDDG IASDHRPTNA CIRVVAYLSR VLESAFTALE GLNKQAFLTE LGNRLEKLLL 300
301 THWQKFTFNP SGGLRLKRDL NEYVGFVKSF GAPSVDEKFE LLGIIANVFI VAPDSLPTLF 360
361 EGSPSIRKDA QRFIQLREDY KSAKLATKLS SLWPSLS
|
| Detection Method: | |
| Confidence: | 13.045757 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
