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View Structure Prediction Details

Protein: gi|79325105, gi|...
Organism: Arabidopsis thaliana
Length: 185 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|79325105, gi|....

Description E-value Query
Range
Subject
Range
gi|218201627 - gi|218201627|gb|EEC84054.1| hypothetical protein OsI_30329 [Oryza sativa Indica Group]
gi|113624513, gi... - gi|50948647|ref|XP_483851.1| putative peroxisomal membrane protein(22-kDa)(PMP22) [Oryza sativa (jap...
169.0 [0..1] [181..1]
gi|110739253, gi... - gi|30794097|gb|AAP40491.1| unknown protein [Arabidopsis thaliana], gi|110739253|dbj|BAF01540.1| hypo...
165.0 [0..1] [185..120]
gi|73980664 - gi|73980664|ref|XP_853776.1| PREDICTED: similar to MpV17 transgene, murine homolog, glomeruloscleros...
164.0 [0..7] [179..113]
gi|111059935, gi... - gi|169616350|ref|XP_001801590.1| hypothetical protein SNOG_11347 [Phaeosphaeria nodorum SN15], gi|11...
164.0 [0..7] [178..1]
MPV17_RAT - Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1
163.0 [0..7] [179..2]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLAKDAWR KYLIQLQAHP LRTKAITAGV LAGCSDAIAQ KISGVKRIQF RRLLLLMLYG  60
   61 FAYGGPFGHF FHKLMDTIFK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKKGNSTVAK KVLLEQLTSS PWNNFLFMSY YGLVVEGRPW KLVKHKLGKD YPTIQLTAWK  60
   61 FWPIVGWVNY QYVPLQFRVL FSSFVASCWS IFLNLKARSP VIKNA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 22.21467
Match: PF04117.4
Description: No description for PF04117.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle