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View Structure Prediction Details

Protein: CND2_ARATH
Organism: Arabidopsis thaliana
Length: 671 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CND2_ARATH.

Description E-value Query
Range
Subject
Range
gi|15225709, gi|... - pir||T02558 hypothetical protein At2g32590 [imported] - Arabidopsis thaliana, gi|3298547|gb|AAC2594...
569.0 [0..1] [671..1]
gi|67972290 - gi|67972290|dbj|BAE02487.1| unnamed protein product [Macaca fascicularis]
535.0 [0..5] [671..27]
gi|114578904 - gi|114578904|ref|XP_001148527.1| PREDICTED: barren isoform 2 [Pan troglodytes]
532.0 [0..5] [671..27]
NCAPH - non-SMC condensin I complex, subunit H
gi|157928526, gi... - gi|157928526|gb|ABW03559.1| non-SMC condensin I complex, subunit H [synthetic construct], gi|1239935...
524.0 [0..5] [671..27]

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Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDESLTPNPK QKPASTTTRI QAPTSPFFLG SNDDRLEREQ ARAARAAASR RRSVIFARGS  60
   61 QPETESDPCF DKQQILELFQ NCIKLASENK INQKNTWELN LIDHLCEIIK VEDENNTETN 120
  121 FQKASCTLEA GVKIYSMRVD SVHSEAYKVL GGITRAGHDD GGDHEDAAGA VENATNQKKQ 180
  181 PEKKISPLST LEPSFDALNV KKFDVAFAVD PLYHQTS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [218-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AQFDEGGAKG LLLNNLGVYG GCQVLFDSQE IPGKLVSSAN KHDKSETIDL SFVKECVEQM  60
   61 VLNMRKKDEI VPSLRAIINQ FDEENQRPSD TFSCGQQTTE SFDISHGNDA SYADDDEGYE 120
  121 NFGTSFDYEG QSGDVDENFG PNEAEPIYSN FHEEVEPASL QDMDS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [383-552]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDRLENVDDY LFLSLGISSK QNSWAGPDHW KYRKTKGPDV QPASEIKSSP PAKKTRKKKQ  60
   61 AEPELDFAKA LEEEMPDIFA PPKNPKTLLL PASRTPCQTK LPEDCHYQPE NLIKLFLLPN 120
  121 VMCLGRRRRK NSGETSRQQP DDYEHGESWG NDNVYDDDDG PFDDNENDQS 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [553-671]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAEDTNTLIS QPRQVNKIDV QYDKASKQVD VQVLKETLWE CLQESHQPPI QDEEHQQEPP  60
   61 ESRSFKVLLA SFPDDCQAAE RTQDISPHLC FICLLHLANE HNLSLIGSQN LDDLTIHLA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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