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View Structure Prediction Details

Protein: unc-27
Organism: Caenorhabditis elegans
Length: 242 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-27.

Description E-value Query
Range
Subject
Range
gi|50761252 - gi|50761252|ref|XP_419242.1| PREDICTED: similar to troponin I slow skeletal muscle isoform [Gallus g...
235.0 [0..19] [223..236]

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Predicted Domain #1
Region A:
Residues: [1-242]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEAGEDAQ RKAAEREAKK AEVRKRLEEA GNKKKAKKGF LTPERKKKLR KLLMVKAAED  60
   61 LKRQQLLKEQ ERQKALADRT ISLPNVDSID DKGQLEKIYN DLWARLTQLE EEKYDINYVV 120
  121 SQTEAEINSL TIEVNDLRGK FVKPSLKKVS KYDNKFKKSG ESKAGTKEDF RANLKIVKKD 180
  181 VMEAIVNVKK KDDKPDWSKK NKDAKAEDSA PAAVAPEAEP VAEEAEAEPE AEEEEGEEEE 240
  241 EE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.39794
Match: 1j1eC
Description: Troponin I
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle