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View Structure Prediction Details

Protein: gi|57899656, gi|...
Organism: Oryza sativa Japonica Group
Length: 507 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|57899656, gi|....

Description E-value Query
Range
Subject
Range
PLSB_VIBPA - Glycerol-3-phosphate acyltransferase OS=Vibrio parahaemolyticus GN=plsB PE=3 SV=1
PLSB_VIBPA - Glycerol-3-phosphate acyltransferase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)...
gi|153839841, gi... - gi|153839841|ref|ZP_01992508.1| glycerol-3-phosphate acyltransferase [Vibrio parahaemolyticus AQ3810...
288.0 [0..1] [501..144]

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Predicted Domain #1
Region A:
Residues: [1-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPMAGGGGV PWGDRARVVG AQIRSRFRVG VAPVDRRWLW RRGDGRVASE AVRQWTERVR  60
   61 SLWQREKSTD QISSSPGTSQ VAAAAKPSSS ALRFYRKKVG KEVDGIEDSV IFRSLQALAV 120
  121 PLIGNACHIF MHGLNSVQIY GAEKLQQALQ ERPKGKPLLT VSNHVAAMDD PFVIASILPP 180
  181 SVMLEAQKLR WTLCASDRCF TNPILSTFFR SVKVLPVSRG DGIYQKGMDM ALSKLNNGGW 240
  241 VHIFPEGSRS KDGGKTVAPA KRGVGRLVMD ADSLPVVIPF VHTGMQDIMP VGKRIPRAGK 300
  301 RVIVVVGDPI NFNDLIIDNS DETQHISRGI LYDKATERIG QRLQELKAEV DRLAAEQKSE 360
  361 LQHHHARDTV NYGTRLWQQV DWEAFGMESS MLSPEPSDVQ EPLKKAKPVL HLESEHAKPE 420
  421 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.0
Match: 1iuqA
Description: The 1.55 A Crystal Structure of Glycerol-3-Phosphate Acyltransferase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [421-507]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LHLEPEQAKH ELHTEQCVPA APSAEICSNF GVPLFFRQHT DPSELMGFAA RGLLKNGRFM  60
   61 EEEGYRELQR QGAMNMFWGS QANNTVL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle