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View Structure Prediction Details

Protein: gi|113534816, gi...
Organism: Oryza sativa Japonica Group
Length: 145 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113534816, gi....

Description E-value Query
Range
Subject
Range
gi|254996494 - gi|254996494|dbj|BAH87095.1| heat shock protein DnaJ [Streptococcus mutans NN2025]
DNAJ_STRMU - Chaperone protein DnaJ OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) GN=dnaJ PE=3 ...
DNAJ_STRMU - Chaperone protein DnaJ OS=Streptococcus mutans GN=dnaJ PE=3 SV=1
154.0 [0..27] [144..95]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLLCPAAA ASYSSLLSSS FPSRRRPQPS APLASPAPSS PPRPRSVAAA AAYGYGGDVL  60
   61 MRPFDTQTLL ISAAVVSAVS LSLVLGLKGD PVPCERCAGN GGTKCVFCND GKMKVENGVV 120
  121 ECRVCKGAGL ILCKKCSGSG YSRRL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.154902
Match: 1nltA
Description: The crystal structure of Hsp40 Ydj1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle