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View Structure Prediction Details

Protein: gi|215697202, gi...
Organism: Oryza sativa Japonica Group
Length: 313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215697202, gi....

Description E-value Query
Range
Subject
Range
CHMU_ARATH - Chorismate mutase, chloroplastic OS=Arabidopsis thaliana GN=CM1 PE=2 SV=2
477.0 [0..27] [313..33]

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Predicted Domain #1
Region A:
Residues: [1-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFNKVVSSY RAASPAPVGM ARGGGGPASR VEFVPSSRRA RLAATNNSVT PVTKEEKQRI  60
   61 DQSEILTLDN IRTSLVRQED SIIFSLLERA QFCYNADIYD KNAFHVDGFD GSLVEFMVRE 120
  121 TEKLHQQVGR YKSPDEHPFF PEDLPEPLLP PLQYPKVLHP IADSININKE IWKMYFDELL 180
  181 PRLVKEGSDG NYGSSALCDT ICLQALSKRI HYGKFVAEAK FQESPEAYMP AIIAQDCDQL 240
  241 MHLLTYETVE RAIEHRVEAK AKIFGQEVDL GAEDNGAPPM YKIRPSLVAE LYSYRIMPLT 300
  301 KEVQVAYLLR RLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 113.0
Match: 2csmA
Description: Allosteric chorismate mutase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
chorismate mutase activity 3.78733095924257 bayes_pls_golite062009
catalytic activity 1.09506175640279 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle