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View Structure Prediction Details

Protein: gi|215695332, gi...
Organism: Oryza sativa Japonica Group
Length: 294 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215695332, gi....

Description E-value Query
Range
Subject
Range
gi|12323420, gi|... - pir||F96736 unknown protein F23N20.18 [imported] - Arabidopsis thaliana, gi|208879514|gb|ACI31302.1...
206.0 [0..5] [263..2]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVSRRKKWV AWVAAVTIFV VLMLVTPAIP QNEEYHDFAD QRRLFLGIPN TLNVISNIPF  60
   61 FFVGVVGLVL CHYKNYFRLN SQGELWSWTL FFAGVTAVAF GSSYY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HLKPNDATLV WDRLPMTIAF TSVMAIFIIE RVDDRAGTKS LAPLVIAGAL SIMYWRFFDD  60
   61 LRPYAVIQFV PCIAIPVMAI VIPPMYTHSS YWLWAAGFYL LAKVEEAADK PIYKWTHQIV 120
  121 SGHTLKHLAA AMVPVFLALM LAKRTVEPER VSLFQRWKVK LVAVRETRFN KDRNTVDYNY 180
  181 IAVSTTPEP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle