| Protein: | YBKF_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 1283 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBKF_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
574.0 | [0..1] | [1283..1] |
|
|
453.0 | [0..5] | [1276..79] |
|
|
446.0 | [0..3] | [1276..261] |
|
|
419.0 | [0..5] | [1235..79] |
|
|
414.0 | [0..1] | [1271..762] |
|
Region A: Residues: [1-209] |
1 11 21 31 41 51
| | | | | |
1 MLVFTDLIFL AIFAHIGKAT AKVWNRNVQG FLDLNLPNEC SQYTTIYSDG PSEYTSTLPY 60
61 THSFSNASVY TTLITITNSQ CTGNYSTLTI SSQPLIHTNT SISKPSQTAT PQNTNTTQVS 120
121 LTNGTTTNSY SNTNSLPITD TINGTTELII PTTSYNNQSH TLIYSTYTST YLPNSTIDLS 180
181 ILPHSTISTL STVSINDTSA SLSKTTSPT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [210-340] |
1 11 21 31 41 51
| | | | | |
1 AGTITETIVS GSVGYTSTFP ASGTTSGTVE VVEPTAGTIT ETIVSGSVGY TSTFPANGTT 60
61 SGTVEVVEPT AGTITETIVS GSVGYTSTFP ANGTTSGTVE VVEPTAGTIT ETIVSGSVGY 120
121 TSTFPANGTT S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.918 | 0.142 | extracellular region | b.60.1 | Lipocalins |
|
Region A: Residues: [341-435] |
1 11 21 31 41 51
| | | | | |
1 GTVEVVEPTA GTVTETIVSG SVGYTSTFPA SGTTSGTVEV VEPTAGTITE TIVSGSKAFT 60
61 STFPANGTTS GTVEVVEPTA GTITKTIVSG SKTFT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [436-542] |
1 11 21 31 41 51
| | | | | |
1 STFPANGTTS GTVEVVEPTA GTITETIVSG SVGYTSTFPA NGTTSGTVEV VEPTAGTITE 60
61 TIVSGSKTFT STFPASGTTS GTVEVVEPTA GTITETIVSG SKAFTST
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [543-1146] |
1 11 21 31 41 51
| | | | | |
1 FPANGTTSGT VEVVEPTAGT ITETIVSGSV GYTSTFPASG TTSGTVEVVE PTAGTVTETI 60
61 VSGSVGYTST FPASGTTSGT VEVVEPTAGT VTETIVSGSV GYTSTFPASG TTSGTVEVVE 120
121 PTAGTITETI VSGSKAFTST FPANGTTSGT VEVVEPTAGT ITETIVSGSK TFTSTFPANG 180
181 TTSGTVEVVE PTAGTITETI VSGSVGYTST FPASGTTSGT VEVVEPTAGT VTETVISGSV 240
241 SFMSTITAHD TSSGAVIVVE PTAGTVTETI VSGSIPFTST IPAQGTTSGT VEVVEPTAGT 300
301 VTETIISGSV GYTSTFPAQG TTSGTVEVVE PTAGTVTETI ISGSVGYTST FPAQGTTSGT 360
361 VEIVAPTAGT VTETIVSGSI PFTSTIPAQG TTSGTVEVVE PTAGTVTETI ISGSVGYTST 420
421 FPAQGTTSGT VEIVAPTAGT VTETIVSGSI PFTSTIPAQG TTSGTVEVVE PTAGTVTETI 480
481 ISGSVGYTST FPAQGTTSGT VEVVEPTAGT VTETIVSGSI PFTSTIPAQG TTSGTVEIVV 540
541 PTAGTVTSTT GSGTSWFTTT VPATGTRSGS VIVVSPTAPA CSSTPFAECP NLNFNFHSKN 600
601 VNFP
|
| Detection Method: | |
| Confidence: | 3.58 |
| Match: | 1pguA |
| Description: | Actin interacting protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.89952932840506 | bayes_pls_golite062009 |
| protein binding | 1.81988423101674 | bayes_pls_golite062009 |
| receptor binding | 0.950768110446255 | bayes_pls_golite062009 |
| receptor activity | 0.357404862871977 | bayes_pls_golite062009 |
|
Region A: Residues: [1147-1283] |
1 11 21 31 41 51
| | | | | |
1 PADIRVISVT PKGNNMYDAT VQFTTSSTMS KKSLSELKIL GLSQTYLLYS YNSKVDNISN 60
61 PGSWTSTVTV QGTSTGSYIC MPHFQIQYDW CSAGVTDMSE CNTWSYQKSY DYITGCNNYD 120
121 NQGNSQTDAS DYCWNVC
|
| Detection Method: | |
| Confidence: | 2.64 |
| Match: | 2j04B |
| Description: | No description for 2j04B was found. |
