YRC Public Data Repository - Protein Structure Prediction

Protein:	CHAC_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	203 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CHAC_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|110743783, gi... - gi\|30102602\|gb\|AAP21219.1\| At4g31290 [Arabidopsis thaliana], gi\|18417778\|ref\|NP_567871.1\| ChaC-like ...	261.0	[0..10]	[202..3]
gi\|215737616, gi... - gi\|51979234\|ref\|XP_507481.1\| PREDICTED OJ1342_D02.8 gene product [Oryza sativa (japonica cultivar-gr...	257.0	[0..10]	[203..3]
CHAC2_RAT - Putative glutathione-specific gamma-glutamylcyclotransferase 2 OS=Rattus norvegicus GN=Chac2 PE=2 SV...	255.0	[0..10]	[200..1]
CHAC2_MOUSE - Putative glutathione-specific gamma-glutamylcyclotransferase 2 OS=Mus musculus GN=Chac2 PE=1 SV=1	254.0	[0..10]	[200..1]
gi\|67525061, gi\|... - gi\|67525061\|ref\|XP_660592.1\| hypothetical protein AN2988.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	253.0	[0..2]	[200..67]
CHAC2 - ChaC, cation transport regulator homolog 2 (E. coli) gi\|114577368 - gi\|114577368\|ref\|XP_515472.2\| PREDICTED: ChaC, cation transport regulator-like 2 [Pan troglodytes]	251.0	[0..10]	[200..1]

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Predicted Domain #1

Region A:
Residues: [1-203]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLSPEGSL WVFGYGSLIW HPPPHYDYSI PCFIKGYVRR FWMRSEDHRG TVNSPGLVLT  60
   61 LIPYEEWKQF SDWSFTPFDE GCWGMAFRIP AKYATQVREY LDDREVNGYT AHSVPVYAHT 120
  121 GDEIPVLENC LVYVGTSKSP QFQPSDDLTQ MAKIISTRRG KSGDNFVYLF ELAKCLRHLS 180
  181 PESKDIHVFE LEAEVRKQMQ KTR

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	5.32
Match:	2pn7A
Description:	No description for 2pn7A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits