YRC Public Data Repository - Protein Structure Prediction

Protein:	YNH1_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	187 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YNH1_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|46432422, gi\|... - gi\|68490044\|ref\|XP_711143.1\| hypothetical protein CaO19.6286 [Candida albicans SC5314], gi\|46432422\|... orf19.6286 - orf19.6286 CGDID:CAL0000597 Assembly 19, Contig19-10242 (6828, 7424) CDS, translated using codon tab...	221.0	[0..2]	[186..1]
gi\|71024161, gi\|... - gi\|71024161\|ref\|XP_762310.1\| hypothetical protein UM06163.1 [Ustilago maydis 521], ref\|XP_403778.1\| ...	150.0	[0..7]	[133..4]
gi\|49655153, gi\|... - gi\|50421855\|ref\|XP_459485.1\| hypothetical protein DEHA0E04422g [Debaryomyces hansenii CBS767], gi\|49...	137.0	[0..9]	[184..2]
gi\|39963189, gi\|... - gi\|39963189\|ref\|XP_364866.1\| hypothetical protein MG09711.4 [Magnaporthe grisea 70-15], gb\|EAA49720....	130.0	[0..8]	[135..3]
gi\|85093251 - gi\|85093251\|ref\|XP_959655.1\| hypothetical protein NCU08163 [Neurospora crassa OR74A] gi\|32416782, gi\|... - gi\|32416782\|ref\|XP_328869.1\| hypothetical protein [Neurospora crassa], gi\|28921102\|gb\|EAA30419.1\| pr...	108.0	[0..8]	[70..3]
gi\|111066614, gi... - gi\|169604656\|ref\|XP_001795749.1\| hypothetical protein SNOG_05343 [Phaeosphaeria nodorum SN15], gi\|11...	106.0	[0..12]	[183..2]
gi\|115398181, gi... - gi\|115398181\|ref\|XP_001214682.1\| predicted protein [Aspergillus terreus NIH2624], gi\|114192873\|gb\|EA...	105.0	[0..9]	[183..1]
gi\|119188197, gi... - gi\|90303491\|gb\|EAS33122.1\| hypothetical protein CIMG_04146 [Coccidioides immitis RS], gi\|119188197\|r...	102.0	[0..12]	[183..7]
gi\|46138001, gi\|... - gi\|46138001\|ref\|XP_390691.1\| hypothetical protein FG10515.1 [Gibberella zeae PH-1], gi\|42546944\|gb\|E...	100.0	[0..7]	[183..1]

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Predicted Domain #1

Region A:
Residues: [1-187]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKKMPMSNK FENFYTLRQV SEVDKKPCFI CYKPTKWVLI TKTKLDFFYV CYNHLQDRGF  60
   61 ATPISVIKSV TNKIDTNKLE AKDESKNVEK DATGNPQESK QEPNLEVQQT EKEKDVDSAS 120
  121 AENESINSSS SSSKECSTQT QSKHYNLHRD IFQMRIRYHA NRAAAEKTAR LLQSGQGLPS 180
  181 PPSKPLP

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	90.886057
Match:	PF08432.1
Description:	No description for PF08432.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits