YRC Public Data Repository - Protein Structure Prediction

Protein:	YN8C_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	205 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YN8C_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|88944793, gi\|... - gi\|88944793\|ref\|ZP_01148017.1\| NTP pyrophosphohydrolases including oxidative damage repair enzymes [...	144.0	[0..9]	[197..6]
gi\|167040190, gi... - gi\|167040190\|ref\|YP_001663175.1\| NUDIX hydrolase [Thermoanaerobacter sp. X514], gi\|166854430\|gb\|ABY9... gi\|241902783, gi... - gi\|241902783\|ref\|ZP_04787514.1\| NUDIX hydrolase [Thermoanaerobacter brockii subsp. finnii Ako-1], gi... gi\|242258345, gi... - gi\|242258345\|ref\|ZP_04803159.1\| NUDIX hydrolase [Thermoanaerobacter sp. X513], gi\|242230130\|gb\|EES32... gi\|76796749, gi\|... - gi\|76796749\|ref\|ZP_00779103.1\| NUDIX hydrolase [Thermoanaerobacter ethanolicus ATCC 33223], gi\|76587...	143.0	[0..6]	[203..2]
gi\|20807759, gi\|... - gi\|20807759\|ref\|NP_622930.1\| NTP pyrophosphohydrolase including oxidative damage repair enzyme [Ther... gi\|20807759 - gi\|20807759\|ref\|NP_622930.1\| NTP pyrophosphohydrolase including oxidative damage repair enzyme [Ther...	138.0	[0..1]	[201..1]
gi\|251810916, gi... - gi\|251810916\|ref\|ZP_04825389.1\| ADP-ribose diphosphatase [Staphylococcus epidermidis BCM-HMP0060], g... gi\|57866974, gi\|... - gi\|57866974\|ref\|YP_188639.1\| MutT/nudix family protein [Staphylococcus epidermidis RP62A], gi\|576376... gi\|27468101, gi\|... - gi\|27468101\|ref\|NP_764738.1\| ADP-ribose pyrophosphatase [Staphylococcus epidermidis ATCC 12228], gi\|...	138.0	[0..9]	[202..5]
gi\|23099306, gi\|... - gi\|23099306\|ref\|NP_692772.1\| ADP-ribose pyrophosphatase [Oceanobacillus iheyensis HTE831], gi\|227775...	137.0	[0..6]	[201..3]
gi\|68196163, gi\|... - gi\|69244809\|ref\|ZP_00603033.1\| NUDIX hydrolase [Enterococcus faecium DO], gi\|68196163\|gb\|EAN10593.1\|... gi\|48826039 - ref\|ZP_00287267.1\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair enzymes [Ent...	137.0	[0..1]	[199..18]
gi\|196251996, gi... - gi\|196251996\|ref\|ZP_03150660.1\| NUDIX hydrolase [Clostridium thermocellum DSM 4150], gi\|196198585\|gb... gi\|48858520, gi\|... - gi\|67916121\|ref\|ZP_00509842.1\| NUDIX hydrolase [Clostridium thermocellum ATCC 27405], gi\|67849923\|gb...	137.0	[0..8]	[199..4]
gi\|74489537, gi\|... - gi\|75762975\|ref\|ZP_00742773.1\| ADP-ribose pyrophosphatase [Bacillus thuringiensis serovar israelensi... gi\|218899257, gi... - gi\|218899257\|ref\|YP_002447668.1\| mutT/nudix family protein [Bacillus cereus G9842], gi\|218541079\|gb\|... gi\|228902606, gi... - gi\|228902606\|ref\|ZP_04066757.1\| ADP-ribose pyrophosphatase [Bacillus thuringiensis IBL 4222], gi\|228... gi\|228849761, gi... - gi\|228909926\|ref\|ZP_04073747.1\| ADP-ribose pyrophosphatase [Bacillus thuringiensis IBL 200], gi\|2288...	136.0	[0..1]	[200..1]
gi\|73662562, gi\|... - gi\|73662562\|ref\|YP_301343.1\| putative ADP-ribose pyrophosphatase [Staphylococcus saprophyticus subsp...	136.0	[0..9]	[201..5]
gi\|82498927, gi\|... - gi\|82498927\|ref\|ZP_00884381.1\| ADP-ribose pyrophosphatase, putative [Caldicellulosiruptor saccharoly...	136.0	[0..9]	[203..5]

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Predicted Domain #1

Region A:
Residues: [1-205]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQDQKPKVL EVSNLENQDA KWTSLKKIRW QDEKGKIRFW EMAERTTRSE ANVDAVAILA  60
   61 IVPIDGSPHV LCQKQFRPPI GKFCIEIPAG LVDSKESCED AAIRELREET GYVGTVMDST 120
  121 TVMYNDPGLT NANLKIILAD IDMSKPENQN PQQQLDDGEY IENFPIKLSS LQEELFSLEK 180
  181 KGFAIDVRLS TFALGLHAGL KYLSS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.69897
Match:	2dscA
Description:	No description for 2dscA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits