YRC Public Data Repository - Protein Structure Prediction

Protein:	YEG5_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	1151 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YEG5_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|85077652 - gi\|85077652\|ref\|XP_956036.1\| hypothetical protein NCU01722 [Neurospora crassa OR74A] gi\|32415363, gi\|... - gi\|32415363\|ref\|XP_328161.1\| hypothetical protein ( (AL356833) related to suppressor protein SPT23 [...	507.0	[0..52]	[902..90]
gi\|42545035, gi\|... - gi\|46109120\|ref\|XP_381618.1\| hypothetical protein FG01442.1 [Gibberella zeae PH-1], gi\|42545035\|gb\|E...	506.0	[0..13]	[938..92]
gi\|159131378 - gi\|159131378\|gb\|EDP56491.1\| membrane-tethered transcription factor (SPT23), putative [Aspergillus fu... gi\|42820661 - gi\|42820661\|emb\|CAF31974.1\| suppressor protein spt23-related, with ankyrin repeats [Aspergillus fumi... gi\|70995740, gi\|... - gi\|70995740\|ref\|XP_752625.1\| membrane-tethered transcription factor (SPT23) [Aspergillus fumigatus A...	502.0	[0..53]	[935..123]
gi\|67517714, gi\|... - gi\|67517714\|ref\|XP_658643.1\| hypothetical protein AN1039.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	496.0	[0..50]	[936..116]
gi\|38102880, gi\|... - gi\|39946644\|ref\|XP_362859.1\| hypothetical protein MG08578.4 [Magnaporthe grisea 70-15], gb\|EAA49663....	490.0	[0..23]	[972..110]
gi\|71021963, gi\|... - gi\|71021963\|ref\|XP_761212.1\| hypothetical protein UM05065.1 [Ustilago maydis 521], ref\|XP_402680.1\| ...	483.0	[0..32]	[1086..131]
gi\|115491809, gi... - gi\|115491809\|ref\|XP_001210532.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	419.0	[0..50]	[935..119]
gi\|83766625 - gi\|83766625\|dbj\|BAE56765.1\| unnamed protein product [Aspergillus oryzae] gi\|169768594 - gi\|169768594\|ref\|XP_001818767.1\| hypothetical protein [Aspergillus oryzae RIB40]	387.0	[0..121]	[936..2]
gi\|108868779, gi... - gi\|157106769\|ref\|XP_001649474.1\| ankyrin 2,3/unc44 [Aedes aegypti], gi\|108868779\|gb\|EAT33004.1\| anky...	386.0	[0..619]	[1094..8]

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Predicted Domain #1

Region A:
Residues: [1-208]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLEFSFGNL IAKNTENSTK EEGTWEVNKL MKFSSEEGRS SSDDYMFSSP DFEKAGNGDA  60
   61 EMREFFNFDG LPDQGLNLPS IAPPSLSHAS SPNLSNSQDE AECLPSDRQQ DYINPSLHLN 120
  121 RTVFPTPQHS ISDANFLANT VDQPLGDNPM FGESDVYLLK MDPMKQAPYE AGFNSVKSSG 180
  181 AIEDPLQFRQ PITMLETPFN ESINTLTP

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [209-449]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YAEDYAFSSL NTSAPPLSNK EYAFSVNHLP AINEHKWKSR VETNMLFELR IKSNDNQSVP  60
   61 FEYLRLPSWA HREDKKRSSK PQPLQPDPET VIHLVPTVLA GDKSSVVKTC CTRCLLRERK 120
  121 RNARSQATKD ACMPNYTKLK AYERNMTDAS PEEKQQFRIK LLNQFPKLED IDEDRMIMVF 180
  181 TGPEYVRLQL DGNERVAHIN ARITCYSSHQ SCPYFHIIWD LYSMSRLVDR LVFPEPVTVL 240
  241 D

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [450-581]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DHKSRNLTKS EKTGKSNSQQ APSNHVLSKS NTVPNLVTGF PTRSDNPPNE KRRRTSSSEN  60
   61 SRALDIQLSA SDSHSPNSKS TLKSVEGSAF SMSKSPSVLS MTTPSGVSPS ISKNGFHVVR 120
  121 VPSDAAGFQQ RQ

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [582-684]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQEEGVLEAH TNESAPIAPF PYCTDDFSFS VEEKSSVNNL LTQFDEVAKP DFVSTPIKEN  60
   61 VDSSFINMTP PDVSHAPLIS RIIPNKGSIM GGYEVTILGA NFF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	32.69897
Match:	2fo1E
Description:	No description for 2fo1E was found.

Predicted Domain #5

Region A:
Residues: [685-1151]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGLVCLFGDN PAAVTFSWSE STIIATCPPA TNAGTVPVTF QNYNSSSEAP VMFTYEDNLD  60
   61 NELYKLTVQV LGLKLTGSIQ NPLTLSKKLL SSWRDDFAQY ITNSIKQPPN SESKGQSKKT 120
  121 LLHDSNMESL KSVISRIVKK DSNQSDDSVE STILAAFALV TDTTTPYLSD FSLVNESGRS 180
  181 LLHLTAACGL SNASTFLCNA GCDVNKRDAL GYTPLHYASL YDHKDICVNL LSNGAKPDVI 240
  241 GASGKKPIDL SSSEPIKLVF KEANNEQAQS ISRSLIKDSE GSINTNETLE STSIVNEIEE 300
  301 SAVQTKSYSE SMWNKTVTMF PSLQELPQNY MSEVPSMMQK AMLSTLKSIS AIPDDVPPPY 360
  361 SEFADDTTAQ AGSSKRDSAI SEDPDHHKSV WWSLRWQSRL VGRGKSTALT PEETRAIQEQ 420
  421 AKTLKKAGMD FMLFSFWLPA LLLLSIFGLR SYAQMIGGYL YRCIIGI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	88.30103
Match:	1n11A
Description:	Ankyrin-R
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits