YRC Public Data Repository - Protein Structure Prediction

Protein:	YKP6_SCHPO
Organism:	Schizosaccharomyces pombe 972h-
Length:	202 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKP6_SCHPO.

Description	E-value	Query Range	Subject Range
gi\|238880308 - gi\|238880308\|gb\|EEQ43946.1\| inorganic phosphate transporter PHO88 [Candida albicans WO-1] orf19.7327 - PHO88 CGDID:CAL0004579 Assembly 19, Contig19-2511 (79684, 79109) CDS, reverse complemented, translat... gi\|68479054, gi\|... - gi\|68479054\|ref\|XP_716461.1\| hypothetical protein CaO19.7327 [Candida albicans SC5314], gi\|46438130\|...	287.0	[0..1]	[186..1]
gi\|151946498 - gi\|151946498\|gb\|EDN64720.1\| phosphate metabolism-related protein [Saccharomyces cerevisiae YJM789] gi\|207347680 - gi\|207347680\|gb\|EDZ73773.1\| YBR106Wp-like protein [Saccharomyces cerevisiae AWRI1631] PHO88_YEAST - Inorganic phosphate transport protein PHO88 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)... PHO88 - Probable membrane protein, involved in phosphate transport; pho88 pho86 double null mutant exhibits ... gi\|190408735 - gi\|190408735\|gb\|EDV12000.1\| inorganic phosphate transporter PHO88 [Saccharomyces cerevisiae RM11-1a]	282.0	[0..1]	[186..1]
gi\|44982279, gi\|... - gi\|45187541\|ref\|NP_983764.1\| ADL332Cp [Ashbya gossypii ATCC 10895], gi\|44982279\|gb\|AAS51588.1\| ADL33... gi\|44982279 - gi\|44982279\|gb\|AAS51588.1\| ADL332Cp [Ashbya gossypii ATCC 10895]	280.0	[0..1]	[186..1]
gi\|49641086 - gi\|49641086\|emb\|CAH02347.1\| KLLA0B09548p [Kluyveromyces lactis] gi\|50304009, gi\|... - gi\|50304009\|ref\|XP_451954.1\| unnamed protein product [Kluyveromyces lactis], gi\|49641086\|emb\|CAH0234...	274.0	[0..1]	[186..1]
gi\|49068842, gi\|... - gi\|71005152\|ref\|XP_757242.1\| hypothetical protein UM01095.1 [Ustilago maydis 521], ref\|XP_398710.1\| ...	270.0	[0..1]	[185..1]
gi\|67902106, gi\|... - gi\|67902106\|ref\|XP_681309.1\| hypothetical protein AN8040.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	267.0	[0..1]	[186..2]
gi\|32420833, gi\|... - gi\|38524235\|emb\|CAE75701.1\| probable PHO88 (involved in phosphate transport) [Neurospora crassa], gi... gi\|85110731 - gi\|85110731\|ref\|XP_963604.1\| hypothetical protein NCU08743 [Neurospora crassa OR74A]	264.0	[0..1]	[186..3]
gi\|50405621, gi\|... - gi\|50405621\|ref\|XP_456447.1\| hypothetical protein DEHA0A02893g [Debaryomyces hansenii CBS767], gi\|49... gi\|49652111 - gi\|49652111\|emb\|CAG84399.1\| DEHA2A02486p [Debaryomyces hansenii]	262.0	[0..1]	[186..1]
gi\|115443262, gi... - gi\|115443262\|ref\|XP_001218438.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	261.0	[0..1]	[186..2]
gi\|116200245, gi... - gi\|88179557\|gb\|EAQ87025.1\| conserved hypothetical protein [Chaetomium globosum CBS 148.51], gi\|11620...	260.0	[0..1]	[186..4]

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Predicted Domain #1

Region A:
Residues: [1-116]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAQVLNLVA ALGVMQYSKK LDFTDPQIVY YARAAYVISN TIIFGVYAII QARINANNDE  60
   61 TPLVYEEPAP PFSGQSNGKL VTTTVKEYDS EQLQKAKRST MMGVAIMAFM HLYMGY

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [117-202]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AQPLVIQSIL PLISLFTNNL VSIYIFNKAA EGSLSRPFAP PAGLFGGGNK PAAAVTGTSS  60
   61 NSNNASAKSD GPTITELNEN ETEKSS

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits