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View Structure Prediction Details

Protein: NPR4_ARATH
Organism: Arabidopsis thaliana
Length: 574 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NPR4_ARATH.

Description E-value Query
Range
Subject
Range
gi|115961306 - gi|115961306|ref|XP_001191069.1| PREDICTED: similar to ankyrin 2,3/unc44 [Strongylocentrotus purpura...
549.0 [0..7] [573..206]

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Predicted Domain #1
Region A:
Residues: [1-496]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAIEPSS SISFTSSHLS NPSPVVTTYH SAANLEELSS NLEQLLTNPD CDYTDAEIII  60
   61 EEEANPVSVH RCVLAARSKF FLDLFKKDKD SSEKKPKYQM KDLLPYGNVG REAFLHFLSY 120
  121 IYTGRLKPFP IEVSTCVDSV CAHDSCKPAI DFAVELMYAS FVFQIPDLVS SFQRKLRNYV 180
  181 EKSLVENVLP ILLVAFHCDL TQLLDQCIER VARSDLDRFC IEKELPLEVL EKIKQLRVKS 240
  241 VNIPEVEDKS IERTGKVLKA LDSDDVELVK LLLTESDITL DQANGLHYAV AYSDPKVVTQ 300
  301 VLDLDMADVN FRNSRGYTVL HIAAMRREPT IIIPLIQKGA NASDFTFDGR SAVNICRRLT 360
  361 RPKDYHTKTS RKEPSKYRLC IDILEREIRR NPLVSGDTPT CSHSMPEDLQ MRLLYLEKRV 420
  421 GLAQLFFPAE ANVAMDVANV EGTSECTGLL TPPPSNDTTE NLGKVDLNET PYVQTKRMLT 480
  481 RMKALMKTVE TGRRYF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.30103
Match: 1n11A
Description: Ankyrin-R
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [497-574]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSCYEVLDKY MDQYMDEEIP DMSYPEKGTV KERRQKRMRY NELKNDVKKA YSKDKVARSC  60
   61 LSSSSPASSL REALENPT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.522879
Match: 1wdyA
Description: Crystal structure of ribonuclease
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle