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View Structure Prediction Details

Protein: MTP5_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 415 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTP5_ORYSJ.

Description E-value Query
Range
Subject
Range
gi|28628306 - gi|28628306|gb|AAO38709.1| cation diffusion facilitator 10 [Stylosanthes hamata]
291.0 [0..4] [410..15]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAVAGGGE EGEELLLLSA VEAGSFGGGG DGGGAGAAAE KSWRLNFDGF RPPEVQQERR  60
   61 PPRGLHHHCL GVLSQGPEDV VAEYYQQQVE MLEGFNEMDT LTDRGFLP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [109-415]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMSKEEREKV ARSETLAIRL SNIANMVLFA AKVYASVRSG SLAIIASTLD SLLDLLSGFI  60
   61 LWFTAFSMQT PNPYRYPIGK KRMQPLGILV FASVMATLGL QIILESVRSL LSDGDEFSLT 120
  121 KEQEKWVVDI MLAVTLVKLA LVLYCRTFTN EIVKAYAQDH FFDVITNMIG LVAALLATYI 180
  181 EGWIDPVGAI ILAIYTIRTW SMTVLENVHS LVGQSASPEY LQKLTYLCWN HHKAVRHIDT 240
  241 VRAYTFGSHY FVEVDIVLPS SMPLQEAHDI GEALQEKLER LPEIERAFVH LDYEFTHRPE 300
  301 HALSHEK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.0
Match: 2qfiA
Description: No description for 2qfiA was found.

Predicted functions:

Term Confidence Notes
transporter activity 0.0225298510244101 bayes_pls_golite062009
transmembrane transporter activity 0.00888573638791978 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle