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View Structure Prediction Details

Protein: gi|56784423, gi|...
Organism: Oryza sativa Japonica Group
Length: 497 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|56784423, gi|....

Description E-value Query
Range
Subject
Range
gi|38000002, gi|... - gi|38000002|gb|AAR07089.1| unknown protein [Oryza sativa (japonica cultivar-group)], gi|115455177|re...
308.0 [0..1] [496..6]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSRRFKPVE ECSSDGRSEQ TVAADFDGTL VRSRSAFPYY LLVALEAGSV LRAVVLLLSV  60
   61 PFVYVTYIFF SESLAISTLV YISVAGLKVR NIEMVARSVL PKFYAEDVHP ESWRVFNSFG 120
  121 KRYIITASPR IMVEHFAKTF LGADKVVGTE LEVGKNGKAT GFMVKPGVLV GDHKRQAVVK 180
  181 ELRDAVPDVG LGDRETDFDF MSICKEAYLV TSRKYSAVPK NQL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.69897
Match: 2hszA
Description: No description for 2hszA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 1.02290994020378 bayes_pls_golite062009
hydrolase activity 0.71914501009647 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [224-497]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSPLILHDGR LVQRPTPLVA LVTFLWMPFG FALALLRVYV NLPLPERIVF YTYKLMGIRL  60
   61 IVKGNPPPPP KKGHPGVLFV CNHRTVLDPV EVAVALRRKV SCVTYSISKF SELISPIKAV 120
  121 ALSREREKDA ENIRRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI VPVAINTKES 180
  181 MFHGSTVRGF KLMDPYFFFM NPRPTYEITF LNQLPKELTC SGGKSPIEVA NYIQKTLSGQ 240
  241 LGFECTAITR KEKYSILAGT DGRVPSKNKE KEKN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.36
Match: 1k30A
Description: Glycerol-3-phosphate (1)-acyltransferase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle