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View Structure Prediction Details

Protein: gi|56783798, gi|...
Organism: Oryza sativa Japonica Group
Length: 312 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|56783798, gi|....

Description E-value Query
Range
Subject
Range
gi|15241123 - gi|15241123|ref|NP_198156.1| transcription regulator [Arabidopsis thaliana]
298.0 [0..12] [309..141]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPCGYGVPII STLDFTARRG TTFASHQYDT GPFYDEIRRR LSFDFTKSQL VEKLRRLKKK  60
   61 YRLCAARMAS SPHAAAAGFA FRTPHEGAIY DLARHIWPPA LKRDGTASDD DDINPAAAA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 15.200659
Match: PF04504.5
Description: No description for PF04504.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [120-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATAAVMTPVA MEDGFGGSAP TPTPTPRGRG GRRVRRRMAQ EQEAAALPSA PALTSTDGAH  60
   61 QEPLVAAMEN TLPQIAQLPP VSETEPMPVI ANGANEEAVR SVLSRLLKEF ITSFAVVGQT 120
  121 GPGMGLNMGF GGAGLNADIA GLGFGIAGLN PGVPGADRWR QHQILELEVY LKRIELVREQ 180
  181 VTAALDELRS SEG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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