| Protein: | gi|115435846, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 420 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115435846, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
223.0 | [0..20] | [415..14] |
|
Region A: Residues: [1-136] |
1 11 21 31 41 51
| | | | | |
1 MGIFSGAGAH RPSCPSAANC AKWAQTYLKY CLCSTRDGMA LTLGLLSVIS WGVAEVPQII 60
61 TNYKHKSTEG LSLAFLMTWI VGDFFNLIGC FLEPETLPTQ FYMALLYTIT TVILTGQTVY 120
121 YSHIYHRLKA KKARAT
|
| Detection Method: |  |
| Confidence: | 24.267606 |
| Match: | PF04193.5 |
| Description: | No description for PF04193.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [137-240] |
1 11 21 31 41 51
| | | | | |
1 SKPQRHQRAD ASLREKLLGP KVIGEIRNNS HLGATVPIPT SSPITVNTEI VRQRHGPSSL 60
61 SEYYYTSARS LSSSPVPMSG TWSANYHQTN SPPEIDDQKE SLVS
|
| Detection Method: | |
| Confidence: | 1.13 |
| Match: | 1qd7B |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [241-306] |
1 11 21 31 41 51
| | | | | |
1 EFSPAQYAAS PLIKNSLSVV PWMSLLLGMS VLHFLVGTTH QEVPNGIVIP VGRRLLLLAD 60
61 DHADSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [307-420] |
1 11 21 31 41 51
| | | | | |
1 VSNGSGSGIG SFLGWAMAVI YMGGRLPQIW LNMKRGNAEG LNPLMFTFAL VGNVTYVGSI 60
61 LVKSMDWSKL KPNLPWLVDA GGCVLLDTFI ILQFLYFHYR KRHVPDEPDS ADKV
|
| Detection Method: | |
| Confidence: | 18.124939 |
| Match: | PF04193.5 |
| Description: | No description for PF04193.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
