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View Structure Prediction Details

Protein: CAO_CHLRE
Organism: Chlamydomonas reinhardtii
Length: 645 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CAO_CHLRE.

Predicted Domain #1
Region A:
Residues: [1-266]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPASLQRKA AAVGGRGPTN QSRVAVRVSA QPKEAPPAST PIVEDPESKF RRYGKHFGGI  60
   61 HKLSMDWLDS VPRVRVRTKD SRQLDDMLEL AVLNERLAGR LEPWQARQKL EYLRKRRKNW 120
  121 ERIFEYVTRQ DAAATLAMIE EANRKVEESL SEEAREKTAV GDLRDQLESL RAQVAQAQER 180
  181 LAMTQSRVEQ NLQRVNELKA EATTLERMRK ASDLDIKERE RIAISTVAAK GPASSSSSAA 240
  241 AVSAPATSAT LTVERPAATT VTQEVP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.98
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #2
Region A:
Residues: [267-645]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STSYGTPVDR APRRSKAAIR RSRGLESSME IEEGLRNFWY PAEFSARLPK DTLVPFELFG  60
   61 EPWVMFRDEK GQPSCIRDEC AHRGCPLSLG KVVEGQVMCP YHGWEFNGDG ACTKMPSTPF 120
  121 CRNVGVAALP CAEKDGFIWV WPGDGLPAET LPDFAQPPEG FLIHAEIMVD VPVEHGLLIE 180
  181 NLLDLAHAPF THTSTFARGW PVPDFVKFHA NKALSGFWDP YPIDMAFQPP CMTLSTIGLA 240
  241 QPGKIMRGVT ASQCKNHLHQ LHVCMPSKKG HTRLLYRMSL DFLPWMRHVP FIDRIWKQVA 300
  301 AQVLGEDLVL VLGQQDRMLR GGSNWSNPAP YDKLAVRYRR WRNGVNAEVA RVRAGEPPSN 360
  361 PVAMSAGEMF SVDEDDMDN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 1uliA
Description: Biphenyl dioxygenase (BphA1A2) derived from Rhodococcus sp. strain RHA1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle