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View Structure Prediction Details

Protein: gi|63147378, gi|...
Organism: Arabidopsis thaliana
Length: 464 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|63147378, gi|....

Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRVNQLPCD CVSTAEESLT SGTCITPTHV TSLSSPLDRS GDVDPLPVSD ESGGSKADES  60
   61 MTDADET

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [68-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKRKRILSGD CEADENNKSD GEIASLNDGV DAFTAICEDL NCSLCNQLPD RPVTILCGHN  60
   61 FCLKCFDKWI DQGNQICATC RSTIPDKMAA NPRVNSSLVS VIRYVKVAKT AGVGTANFFP 120
  121 FTSNQDGPEN AFRTKRAKIG EENAARIYVT VPFDHFGPIP AEHD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.30103
Match: 2cklB
Description: No description for 2cklB was found.

Predicted Domain #3
Region A:
Residues: [232-464]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVRNQGVLVG ESWENRVECR QWGVHLPHVS CIAGQEDYGA QSVVISGGYK DDEDHGEWFL  60
   61 YTGRRGRHFA NEDQEFEDLN EALRVSCEMG YPVRVVRSYK DRYSAYAPKE GVRYDGVYRI 120
  121 EKCWRKARFP DSFKVCRYLF VRCDNEPAPW NSDESGDRPR PLPNIPELET ASDLFERKES 180
  181 PSWDFDEAEG RWRWMKPPPA NHEQRERMKM AMTCLLLFVL IILVGSSSIL YQY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.69897
Match: 2zo0B
Description: No description for 2zo0B was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle