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View Structure Prediction Details

Protein: gi|56202374, gi|...
Organism: Oryza sativa Japonica Group
Length: 435 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|56202374, gi|....

Description E-value Query
Range
Subject
Range
gi|108883176, gi... - gi|157119461|ref|XP_001653393.1| protoheme ix farnesyltransferase [Aedes aegypti], gi|108883176|gb|E...
244.0 [0..7] [396..50]

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Predicted Domain #1
Region A:
Residues: [1-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRGGATAAS AARALRSRLI PDTSHHPATA LAPIASPRSS SSSSSSSAPT IAAAVPAVAE  60
   61 ATAAAAAVSR QAGSVSDALR HYGRCYFELS KARLSALVVA TSGAGYVLGS GNMVDIAGLC 120
  121 CTCAGTMMVA ASANTLNQVF EIKNDAKMKR TMRRPLPSGR ISPAHAAMWA TSVGVAGTAL 180
  181 LAWKANGLAA GLAASNLILY AFVYTPLKQI HPVNTWVGAV VGAIPPLLGW AAASSELSLN 240
  241 AMILPAALYY W

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [252-435]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QIPHFMALAY LCRNDYLAGG YRMFSFADPT GKRTAWVSLR NCLYMLPLGF FAYNWGLTSE  60
   61 WFSLEASLLT LGLTIGALSF VLEPTPKTAR RMFYGSLLYL PAFMAGLLLH RLPNEQKEHN 120
  121 VTQTSEITGI LYGAEQQDEE RARQKREDRK PSRIHSRPPV AYASVAPFPF LPVPIYVSTQ 180
  181 GHEL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle